Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr2g01258 ATGGATCAGAAAACGCTGGAAGAAGGGGGACAAAACGATTTGAATTTTAAGTGTGCGAAGATTCTTCATGGAGCTGATAAATCTATCGCTTGCCAGACTCCAGAGAAGACTAGTGAACCCTTACCTACCAAACCCAAGGAGGGATCCACCGAGCTTCCAGAAACATACAAGGCTTTAGCAGATTTATTTGATCATATGAGTTGTTCACTGAGGTTGCTTCGTCTGTGTAAAAAGTCTACAACCTTTCAAAACATTTGTTCCCAAGTTGAAGTTCTCGCTAAAAGAAAATTCTTGTACACGGATCTTGCGAAGATAAAGTATATACTTCATGAAGCCATACATGTAGAGAAGATATTAGTACATGACAATAGAAACTTGTGTATGAAGCCTGATTTGAAGATCACCATTGTATATGAGGTTGTGCTAGGAGACTCTAGTGAACGTAATTATATGGCACTCCGGAAACTGTTTGGTTCTAGGCTGCTTGAGTTCTTCAATAGGTATCCAGAGAATACTGATATTCCAGAAGCTACACTACCAGAACCTTTTCAACAAAGAGCTCATAGCTTGATTTGTGAGGACTTGCCTGTAGATCCTTCAACAATACTCTCACCTCCAATTTCTGATCAAAATCAACAGCTATCACAGGAATGTAAGCCATATCCTGTTAAAAGGCATTTCTCAAAGAAGAAGGTTGTGGCAGAGACAGAAAATAATGTGGCAAGTCAAATTGCTCAGTCACATCATTCATATGACTGCTTGGATAATGAAGGAGGTGAAGGTGACAGTGAATGGCAGAAAAAATGTACTACATATTTGAAATCTGATCAGGAAATGGAAAAAGAACAGCAGAATGAATCATTTTCTATGGGATTACAAAGTAGTGTTGTTAATACACCAGCGCGTCTGATTTGCTCTCCACAGTCTGTTAGTTGTGGTAGTTATGAAAGCTCTTGTCTCAAGATTGCCTTGTCCACAGATGTGTTAATGGCAAAAACACCTGCTCAGTCAACACCTAGAAGATTGGCGCACAATTCTGATGTTAAGCTTAATATTATGACCACCCAAAATTCAATTTCAAGCAATAAGCATGTAAAAAGAGTTCTTTTTTCACATGAAGGTAATTATGATGTTGATAAGTTACAACCAAGTAGAGATGCTTGTGATAACATCCCTGAAGCTAGTGAAGCACGCACTGAGGATTTTGATGTTTCTAATTCTGTTGTTCTTTCCCATAAGGTGGCTGAGTGCAATGATTGTTCTCATGAAAATACAAATCTGACACAAGGTCGTTCAACAACCTGGCAGCAGATGCCGTCATCGTTGCTTGGCCTTGTTGATGTGATATATTCTATATTTTGTTCCATCAAATGCTCTCCAATCACAAAATCGGAGCTCCTGCACAAGATACTAATGAACAGCTTAGATTTTGTTGAGATGAGAGAAGCTGAAGAGCAGATTAATTTTCTTGAAAATTTAGTGCCAGATTGGATCTACACGAAGTCAGGCCCCAGTGGAGATACTATGTACTGCATTAAGGAAGTGCCAGATTTGGAGTCTGTTCGATCAAGGCTATCTGGCAATATCATTAAGGCTTCGTGA 1602 0.392 MDQKTLEEGGQNDLNFKCAKILHGADKSIACQTPEKTSEPLPTKPKEGSTELPETYKALADLFDHMSCSLRLLRLCKKSTTFQNICSQVEVLAKRKFLYTDLAKIKYILHEAIHVEKILVHDNRNLCMKPDLKITIVYEVVLGDSSERNYMALRKLFGSRLLEFFNRYPENTDIPEATLPEPFQQRAHSLICEDLPVDPSTILSPPISDQNQQLSQECKPYPVKRHFSKKKVVAETENNVASQIAQSHHSYDCLDNEGGEGDSEWQKKCTTYLKSDQEMEKEQQNESFSMGLQSSVVNTPARLICSPQSVSCGSYESSCLKIALSTDVLMAKTPAQSTPRRLAHNSDVKLNIMTTQNSISSNKHVKRVLFSHEGNYDVDKLQPSRDACDNIPEASEARTEDFDVSNSVVLSHKVAECNDCSHENTNLTQGRSTTWQQMPSSLLGLVDVIYSIFCSIKCSPITKSELLHKILMNSLDFVEMREAEEQINFLENLVPDWIYTKSGPSGDTMYCIKEVPDLESVRSRLSGNIIKAS 533
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr2g01258 533 CDD Cdt1_m 33 205 IPR014939 -
Accr2g01258 533 PANTHER DNA REPLICATION FACTOR CDT1 36 527 IPR045173 GO:0003677|GO:0030174|GO:0071163
Accr2g01258 533 SMART CDT1_2 52 181 IPR014939 -
Accr2g01258 533 Gene3D - 432 531 IPR038090 -
Accr2g01258 533 Pfam DNA replication factor CDT1 like 52 117 IPR014939 -
Accr2g01258 533 SUPERFAMILY "Winged helix" DNA-binding domain 49 183 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr2g01258 Accr-Chr2 41241230 41246528 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr2g01258 51 525 Core DNA Replication Machinery Family AT2G31270 29.328 3.15e-40 151
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr2g01258 K10727 - qsa:O6P43_005403 442.58