Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr2g01236 ATGTTATCCCGGGGTTTCGAAATCAGCGATGGCCTGGAGTTCGTAGACCATCCTGAAAATGGAATTGCGGTGAGAGCTTTGTACCAATTGAAGGAAGGCGATGTTGTTGCCAAAATACCCAAGGATGCTTGCCTGACGGTTAAGACTAGTGGGGCGAGTCAAATGATCGAACACTCTGGTTTGGATGGTAAATTGGGACTGGCAGTGGCTCTCATGTATGAGAGAAGCTTGGGCGAGAAGTCTCCCTGGGCTGGCTACCTTCAGCTTTTGCCTCACCATGAGTGCCTGCCGTTAATGTGGACTCTGAACGAGGTAAACGAGCTTTTGAGTGGGACTGAGCTACACAAGACAGTGCAAGAGGACAAAGCTCTTATGTATGAGGACTGGAAAGAGAATATTCTGCCCATCTTGGATTTTTCACCTTCGAAGCTTAACCCAAAATATTTTGGTGTAGAAGAATATTTTGCTGCAAGAAGTCTTGTTGCTTCACGAGCTTTTGAGATAGATGATTACCATGGCTTTGGCATGGTTCCATTGGCAGACCTGTTCAATCATAAAACAGATGCTGAGGATGTGCATTTCACCTCTGTATCCTCAAACTATGAATCTGACAGTGATGATGATGATGAAGATGAGTGTGTCACAGATGAAGAACTGACAAAAAGTTCTTCCATGGATGAGCCTGAATTGGATCCTGCTCTTACTGGGAAATGCAGTGGTGGCAACTTGGAGCCATCTTCGGTTGTAGGAGATGATCCTTCAATGTTGGAGATGATTATGATAAAAGATGTCAGCGTTGGAGCTGAGGTATTTAACACTTATGGGTCAATGGGTAATGCTGCTTTACTTCATAGATATGGATTCACTGAGCAAGATAACCCCTATGATATTGTGAACATTGATTTGGAAATGGTTCTTCAGTGGTGTTCTTCTTTGTTTTCAGCTCGATACACTCGAGCAAGAGTCTCTTTCTGGAGAAAGCTGGGCTATTCTGCATGCATCAGCCAAAACTCAGAATATTTTGAGATATCATCTGATGGAGAACCACAGTTTGAACTCCTGATTCTATTATACATTATGTTATTACCAGAAGATGTGTACAATAAGTTAGACTTATCAGTGTCGGTTGCAGGAAATATTCATGAATCAAGTGAAACTTCTCTATCAGGAGATTGGAATATCTTGACAAAGAAAGCATCTAACATGAGTAAGGAATCCTTGCTGTCTATAAAAGTTTGTGATGCTTTGTTGGCTGTTGCTGATATACGTGAAAGTCTCTATGGTCTGAACTCAATAGAAGACGATATTGAGGCATCAGGAAGGTTTAACTGTGTTGGAGAAAGAAAGCTGTTTCATTCTTTGGTTCTGCGCATCAGTGAAAGGAAGATCCTTGAAAAGCTAAGAAATTATTCTGCCCAGCCAAATAGGTTTGGTAAGAGAAATTCTGCAAGGAAGAAAATGAAAAGCAAAAAAAAGTAA 1479 0.4151 MLSRGFEISDGLEFVDHPENGIAVRALYQLKEGDVVAKIPKDACLTVKTSGASQMIEHSGLDGKLGLAVALMYERSLGEKSPWAGYLQLLPHHECLPLMWTLNEVNELLSGTELHKTVQEDKALMYEDWKENILPILDFSPSKLNPKYFGVEEYFAARSLVASRAFEIDDYHGFGMVPLADLFNHKTDAEDVHFTSVSSNYESDSDDDDEDECVTDEELTKSSSMDEPELDPALTGKCSGGNLEPSSVVGDDPSMLEMIMIKDVSVGAEVFNTYGSMGNAALLHRYGFTEQDNPYDIVNIDLEMVLQWCSSLFSARYTRARVSFWRKLGYSACISQNSEYFEISSDGEPQFELLILLYIMLLPEDVYNKLDLSVSVAGNIHESSETSLSGDWNILTKKASNMSKESLLSIKVCDALLAVADIRESLYGLNSIEDDIEASGRFNCVGERKLFHSLVLRISERKILEKLRNYSAQPNRFGKRNSARKKMKSKKK 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr2g01236 492 Gene3D set domain protein methyltransferase, domain 1 1 288 - -
Accr2g01236 492 SUPERFAMILY SET domain 252 293 IPR046341 -
Accr2g01236 492 MobiDBLite consensus disorder prediction 202 216 - -
Accr2g01236 492 MobiDBLite consensus disorder prediction 198 249 - -
Accr2g01236 492 PIRSF RMS1_SET 1 474 IPR011383 GO:0016279|GO:0018026
Accr2g01236 492 SUPERFAMILY SET domain 3 196 IPR046341 -
Accr2g01236 492 CDD SET_LSMT 11 289 - -
Accr2g01236 492 PANTHER UNCHARACTERIZED PUTATIVE METHYLTRANSFERASE 5 400 - -
Accr2g01236 492 Pfam SET domain 21 275 IPR001214 GO:0005515
Accr2g01236 492 ProSiteProfiles SET domain profile. 10 275 IPR001214 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr2g01236 Accr-Chr2 40864722 40868068 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr2g01236 1 490 NAC Transcription Factor Family AT3G56570 55.491 0.0 518
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Accr2g01236 SET 5.5e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr2g01236 - K05302 vra:106769924 636.721
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr2g01236 2 40864722 40868068 Accr2g01236 2 40864722 40868068 ECH