Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr2g01235 ATGGTCACCTCCAGGCGGCTTAGGGCATTCAAGCGATGGATGTTATCCCGGGGTTTCGAAATCAGCGATGGCCTGGAGTTCGTAGACCATCCTGAAAATGGAATTGCGGTGAGAGCTTTGTACCAATTGAAGGAAGGCGATGTTGTTGCCAAAATACCCAAGGATGCTTGCCTGACGGTTAAGACTAGTGGGGCGAGTCAAATGATCGAACACTCTGGTTTGGATGGTAAATTGGGACTGGCAGTGGCTCTCATGTATGAGAGAAGCTTGGGCGAGAAGTCTCCCTGGGCTGGCTACCTTCAGCTTTTGCCTCACCATGAGTGCCTGCCGTTAATGTGGACTCTGAACGAGGTAAACGAGCTTTTGAGTGGGACTGAGCTACACAAGACAGTGCAAGAGGACAAAGCTCTTATGTATGAGGACTGGAAAGAGAATATTCTGCCCATCTTGGATTTTTCACCTTCGAAGCTTAACCCAAAATATTTTGGTGTAGAAGAATATTTTGCTGCAAGAAGTCTTGTTGCTTCACGAGCTTTTGAGATAGATGATTACCATGGCTTTGGCATGGTTCCATTGGCAGACCTGTTCAATCATAAAACAGATGCTGAGGATGTGCATTTCACCTCTGTATCCTCAAACTATGAATCTGACAGTGATGATGATGATGAAGATGAGTGTGTCACAGATGAAGAACTGACAAAAAGTTCTTCCATGGATGAGCCTGAATTGGATCCTGCTCTTACTGGGAAATGCAGTGGTGGCAACTTGGAGCCATCTTCGGTTGTAGGAGATGATCCTTCAATGTTGGAGATGATTATGATAAAAGATGTCAGCGTTGGAGCTGAGGTATTTAACACTTATGGGTCAATGGGTAATGCTGCTTTACTTCATAGATATGGATTCACTGAGCAAGATAACCCCTATGATATTGTGAACATTGATTTGGAAATGGTTCTTCAGTGGTGTTCTTCTTTGTTTTCAGCTCGATACACTCGAGCAAGAGTCTCTTTCTGGAGAAAGCTGGGCTATTCTGCATGCATCAGCCAAAACTCAGAATATTTTGAGATATCATCTGATGGAGAACCACAGTTTGAACTCCTGATTCTATTATACATTATGTTATTACCAGAAGATGTGTACAATAAGTTAGACTTATCAGTGTCGGTTGCAGGAAATATTCATGAATCAAGTGAAACTTCTCTATCAGGAGATTGGAATATCTTGACAAAGAAAGCATCTAACATGAGTAAGGAATCCTTGCTGTCTATAAAAGTTTGTGATGCTTTGTTGGCTGTTGCTGATATACGTGAAAGTCTCTATGGTCTGAACTCAATAGAAGACGATATTGAGGCATCAGGAAGGTTTAACTGTGTTGGAGAAAGAAAGCTGTTTCATTCTTTGGTTCTGCGCATCAGTGAAAGGAAGATCCTTGAAAAGCTAAGAAATTATTCTGCCCAGCCAAATAGGTTTGGTAAGAGAAATTCTGCAAGGAAGAAAATGAAAAGCAAAAAAAAGTAA 1518 0.4196 MVTSRRLRAFKRWMLSRGFEISDGLEFVDHPENGIAVRALYQLKEGDVVAKIPKDACLTVKTSGASQMIEHSGLDGKLGLAVALMYERSLGEKSPWAGYLQLLPHHECLPLMWTLNEVNELLSGTELHKTVQEDKALMYEDWKENILPILDFSPSKLNPKYFGVEEYFAARSLVASRAFEIDDYHGFGMVPLADLFNHKTDAEDVHFTSVSSNYESDSDDDDEDECVTDEELTKSSSMDEPELDPALTGKCSGGNLEPSSVVGDDPSMLEMIMIKDVSVGAEVFNTYGSMGNAALLHRYGFTEQDNPYDIVNIDLEMVLQWCSSLFSARYTRARVSFWRKLGYSACISQNSEYFEISSDGEPQFELLILLYIMLLPEDVYNKLDLSVSVAGNIHESSETSLSGDWNILTKKASNMSKESLLSIKVCDALLAVADIRESLYGLNSIEDDIEASGRFNCVGERKLFHSLVLRISERKILEKLRNYSAQPNRFGKRNSARKKMKSKKK 505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr2g01235 505 CDD SET_LSMT 24 302 - -
Accr2g01235 505 SUPERFAMILY SET domain 4 209 IPR046341 -
Accr2g01235 505 Pfam SET domain 34 288 IPR001214 GO:0005515
Accr2g01235 505 PANTHER UNCHARACTERIZED PUTATIVE METHYLTRANSFERASE 6 413 - -
Accr2g01235 505 SUPERFAMILY SET domain 265 306 IPR046341 -
Accr2g01235 505 MobiDBLite consensus disorder prediction 211 262 - -
Accr2g01235 505 MobiDBLite consensus disorder prediction 215 229 - -
Accr2g01235 505 PIRSF RMS1_SET 1 487 IPR011383 GO:0016279|GO:0018026
Accr2g01235 505 Gene3D set domain protein methyltransferase, domain 1 3 301 - -
Accr2g01235 505 ProSiteProfiles SET domain profile. 23 288 IPR001214 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr2g01235 Accr-Chr2 40864722 40868259 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr2g01235 1 503 NAC Transcription Factor Family AT3G56570 56.391 0.0 545
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Accr2g01235 SET 5.9e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr2g01235 - K05302 vra:106769924 655.981