Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr2g01233 ATGGAGTCTGGAATTGTTGGTATTGATGAGAAGAAGCCAAGCGTGGAGGGGCATGGTGCAGATCAGAAGAAGAAGAAGGCGATAATAATAAGGTACAGAGAATGCATGAAGAACCATGCAGCTTCAATAGGAGGGAACGCAGCAGATGGATGTGGTGAGTTCATGGCCTCAGAAGAAGACTCTCTCAAGTGCTCAGCCTGCAACTGCCACAGAAACTTCCACAGAAAATACTTTGAAGAAACTCAAGATTCTGATAATACCCCTTCTTCTCCATATTACCATCTTCCTTCACAGATGATGATGCTTCTTCCAAAAGATGTTGCTGGTGGTGATGATCAACATGATCAGGTCGTGAAACCGTTATTGACCCATGATTTGTGTCTCACAAATTATAATAAAAGTGGTTGTTTAGATCATGATGAGAGTGATGAAAAGAGGGTGATGATGGTGAAGAATAAGAGGCACAGGACAAAGTTCAGTGAAGAGCAGAAGGAGAAGATGCTGGGATTTGCGGACAAGGTTGGGTGGAGGATGCAGAAAGTGGATGAATCCATGGTTCAGCAGTTTTGTGAAGAAGCTGGCATCAAGAGAAGAGTCCTCAAAGTGTGGATGCACAATAACAAGAACTCTTTTGCCAAGAGAAGAAACCACCTTATCTCCACTAGCTGA 669 0.4335 MESGIVGIDEKKPSVEGHGADQKKKKAIIIRYRECMKNHAASIGGNAADGCGEFMASEEDSLKCSACNCHRNFHRKYFEETQDSDNTPSSPYYHLPSQMMMLLPKDVAGGDDQHDQVVKPLLTHDLCLTNYNKSGCLDHDESDEKRVMMVKNKRHRTKFSEEQKEKMLGFADKVGWRMQKVDESMVQQFCEEAGIKRRVLKVWMHNNKNSFAKRRNHLISTS 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr2g01233 222 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 22 210 - -
Accr2g01233 222 FunFam Zinc-finger homeodomain protein 2 139 213 - -
Accr2g01233 222 ProSiteProfiles Zinc-finger ZF-HD dimerization-type profile. 32 77 IPR006456 -
Accr2g01233 222 MobiDBLite consensus disorder prediction 1 20 - -
Accr2g01233 222 NCBIfam homeobox domain, ZF-HD class 153 209 IPR006455 -
Accr2g01233 222 Pfam ZF-HD protein dimerisation region 30 77 IPR006456 -
Accr2g01233 222 NCBIfam ZF-HD homeobox protein Cys/His-rich dimerization domain 31 76 IPR006456 -
Accr2g01233 222 SUPERFAMILY Homeodomain-like 143 213 IPR009057 -
Accr2g01233 222 Gene3D - 138 213 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr2g01233 Accr-Chr2 40770970 40771638 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr2g01233 23 218 ZF-HD Transcription Factor Family AT2G02540 42.534 4.32e-57 181
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF zf-HD Accr2g01233 ZF-HD_dimer 5.6e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr2g01233 - - pcin:129302889 259.61
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr2g01233 2 40770970 40771638 Accr2g01233 2 40770970 40771638 ECH