Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr2g01230 ATGGTCGTTTGTGGTGGGAAGCCATTGAAGCGGATGAAGAGGAGAGTGACGGCTGATTTCTACGATTTTCTCACGTTCCCGTCCCCTTCAGTCGCTGGAGAAGATTTCTCCGGTGGACCCTTCCGGACGAACGTGAGATCTTTTCTGTCGAAGCACGCGCTGCTCCCACCGCCTTCGGCTCTGTTCCCTCACCTCATGACGTGGCAGATCCTGTTCCGAGTCGGTGATCTGACGGACGGCCCGGAATCCAGTCCAGCGGTGGTTTGCCTCGATGTTATCGAAGAGGATGTGGTCAGATCTAGATCCGTCTACTGCGATCAGTGCCGAGTTGTTGGTTGGAGTGGCCATCCAGTATGCGGAAAACGGTACCATTTTATAATCAAGGCTGATGGTACTTCCATTGGTGGGTACCACAAGCCATGTATGTGCTGTGGAGACATCTTGCACTTGTCAGAATCCAAGTGCAAGTCATGCAACCATGTGACGACCACGGATGATGTTGAAGATTGGGTCTATCACCAGTTAGAAAGCACAACTCATCTTTTACATGGTGTAGTCCATTCTAATGGTTATGGTCACCTTCTTCGAGTTAATGGCAGAGAAGGTGGCTCAAAATTTCTTTCTGGGTGCCATATCATGGACTTCTGGGATCGCCTCTGCCAGACACTTGGAGTTAGAAAAGTTAGCGTGATGGATGTGTCAAAGAAGTATGGGTTGGAGTACCGGCTGCTCCATGCTATTACTAAGGGACATCCTTGGTATGGTCATTGGGGTTATCAATTTGGTTCTGGTAGCTATGGTCTTACTCATGAATCATACAAGTCTGCTGCAGAATTCCTGTCCAATATGCCCTTGTCCGCCTTTCTTTACCCGGGGCAGAAATGTGATTCTCGTGTACAAGACATGATCTCATATTACCAGTCTTTGTCAAAGAATGTGCTTGTAAATATAAGGGACCTCTTTTGTTTTGTACTGGGTTTGATTCATGATGCTCGCAAGACTGCTGCATCAAAGAACGTTGATGACATCATCGGTAAGAAGAGACGTGTGAATGCTACAGGAGTGTCTTCTTCATGGACTAAGAGTGACATTGAATGTGTGGAGGAGGCCATGCTCAGAGTTCTGCGAGCTGTGTCTGGGTCCAATTGGGTGAGCTGGCGTGCTTTAAGGGGTGCTGTCTGCAAGGTAGCCTCTCCAGAACTGCTTGATCATTGCCTCGGAGAATTGGGAGGAAAAGTGGTCCTTGGTGCAATGGTGAATACCCGATGCAATCCTGTTACTGGTGCTTTTGAGTACAGACTAGAGACTGTGAACAATTCTCGCAATGAACTTGCAAGCAACATTTCTTCAGGCCTAAAGTATCCATCTGAAGTGACTCTTCTCCATGACTTGAGATACTTTTATAATTCCCTTCTTCATCCTCAGATGATGTTGAGCTATGATCCAGGGGAGACAAGGGCAATTGCCATGAGCTCTGCTCAGAAACTTATTGACTGCAAGCAGTTTGTAAAGGACTTTAAACCTGAGACATTGCCACTGACCAACCCGTCTAAGATACGCTTCTCATGTCAAATAGAACTAGAAGATGAATCTGAAGATTTTGCTGCACACCTTCCTCCAGAATTAGTTATACTCCCTGTAAATGCCACCATATCTGACCTCAAGCTTGAAGCAACAAATGCTTTTCAAGATGTATATGTCATGTTCAGAAAACTTCAAATTGATGAGCTACTTGGCTATAATGTCGATGATTCCTCCCAGGTCAAGCACTTGTCTGGATCTATGTTCAATGCAGTCCGGCTGCGAGGAAAATGCATTGGCAAGAATGGGTTGAGCAAATTCCAAATGGAACGGGGCACGGAGAGGTGGACTGTGGATTGCAGTTGTGGGGTCAAGGACGATGATGGCGAGAGAATGTTGGCTTGTGACATATGTGGAGTGTGGAGACACACAAGGTGCTGTGGTATTCATGACGCAGATCCTGTTCCTGCACAGTTTGTTTGTCCAAAGTGCCAAAACTGTGACCCCAAACCCAAACCCAATGGACCCTGCGAGGATGACATTGTGAATGGTATTACTGCTAACAAGAACTGCTTGCTGGTAGAATCTGATGTTCGTTGA 2121 0.4672 MVVCGGKPLKRMKRRVTADFYDFLTFPSPSVAGEDFSGGPFRTNVRSFLSKHALLPPPSALFPHLMTWQILFRVGDLTDGPESSPAVVCLDVIEEDVVRSRSVYCDQCRVVGWSGHPVCGKRYHFIIKADGTSIGGYHKPCMCCGDILHLSESKCKSCNHVTTTDDVEDWVYHQLESTTHLLHGVVHSNGYGHLLRVNGREGGSKFLSGCHIMDFWDRLCQTLGVRKVSVMDVSKKYGLEYRLLHAITKGHPWYGHWGYQFGSGSYGLTHESYKSAAEFLSNMPLSAFLYPGQKCDSRVQDMISYYQSLSKNVLVNIRDLFCFVLGLIHDARKTAASKNVDDIIGKKRRVNATGVSSSWTKSDIECVEEAMLRVLRAVSGSNWVSWRALRGAVCKVASPELLDHCLGELGGKVVLGAMVNTRCNPVTGAFEYRLETVNNSRNELASNISSGLKYPSEVTLLHDLRYFYNSLLHPQMMLSYDPGETRAIAMSSAQKLIDCKQFVKDFKPETLPLTNPSKIRFSCQIELEDESEDFAAHLPPELVILPVNATISDLKLEATNAFQDVYVMFRKLQIDELLGYNVDDSSQVKHLSGSMFNAVRLRGKCIGKNGLSKFQMERGTERWTVDCSCGVKDDDGERMLACDICGVWRHTRCCGIHDADPVPAQFVCPKCQNCDPKPKPNGPCEDDIVNGITANKNCLLVESDVR 706
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr2g01230 706 CDD PHD_MMD1_like 626 671 - -
Accr2g01230 706 Pfam PHD-finger 627 674 IPR019787 -
Accr2g01230 706 PANTHER PHD FINGER PROTEIN MALE MEIOCYTE DEATH 1-RELATED 13 680 - -
Accr2g01230 706 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 611 676 IPR013083 -
Accr2g01230 706 SMART PHD_3 626 672 IPR001965 -
Accr2g01230 706 SUPERFAMILY FYVE/PHD zinc finger 616 673 IPR011011 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr2g01230 Accr-Chr2 40718380 40723630 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr2g01230 84 680 PHD Transcription Factor Family AT5G22260 30.903 7.58e-90 293
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR PHD Accr2g01230 PHD 4.6e-07 CL0390
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr2g01230 K26271 - gmx:100818189 1059.67
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr2g01230 2 40718380 40723630 Accr2g01230 2 40718380 40723630 ECH