Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr2g01229 ATGGTCGTTTGTGGTGGGAAGCCATTGAAGCGGATGAAGAGGAGAGTGACGGCTGATTTCTACGATTTTCTCACGTTCCCGTCCCCTTCAGTCGCTGGAGAAGATTTCTCCGGTGGACCCTTCCGGACGAACGTGAGATCTTTTCTGTCGAAGCACGCGCTGCTCCCACCGCCTTCGGCTCTGTTCCCTCACCTCATGACGTGGCAGATCCTGTTCCGAGTCGGTGATCTGACGGACGGCCCGGAATCCAGTCCAGCGGTGGTTTGCCTCGATGTTATCGAAGAGGATGTGGTCAGATCTAGATCCGTCTACTGCGATCAGTGCCGAGTTGTTGGTTGGAGTGGCCATCCAGTATGCGGAAAACGGTACCATTTTATAATCAAGGCTGATGGTACTTCCATTGGTGGGTACCACAAGCCATGTATGTGCTGTGGAGACATCTTGCACTTGTCAGAATCCAAGTGCAAGTCATGCAACCATGTGACGACCACGGATGATGTTGAAGATTGGGTCTATCACCAGTTAGAAAGCACAACTCATCTTTTACATGGTGTAGTCCATTCTAATGGTTATGGTCACCTTCTTCGAGTTAATGGCAGAGAAGGTGGCTCAAAATTTCTTTCTGGGTGCCATATCATGGACTTCTGGGATCGCCTCTGCCAGACACTTGGAGTTAGAAAAGTTAGCGTGATGGATGTGTCAAAGAAGTATGGGTTGGAGTACCGGCTGCTCCATGCTATTACTAAGGGACATCCTTGGTATGGTCATTGGGGTTATCAATTTGGTTCTGGTAGCTATGGTCTTACTCATGAATCATACAAGTCTGCTGCAGAATTCCTGTCCAATATGCCCTTGTCCGCCTTTCTTTACCCGGGGCAGAAATGTGATTCTCGTGTACAAGACATGATCTCATATTACCAGTCTTTGTCAAAGAATGTGCTTGTAAATATAAGGGACCTCTTTTGTTTTGTACTGGGTTTGATTCATGATGCTCGCAAGACTGCTGCATCAAAGAACGTTGATGACATCATCGGTAAGAAGAGACGTGTGAATGCTACAGGAGTGTCTTCTTCATGGACTAAGAGTGACATTGAATGTGTGGAGGAGGCCATGCTCAGAGTTCTGCGAGCTGTGTCTGGGTCCAATTGGGTGAGCTGGCGTGCTTTAAGGGGTGCTGTCTGCAAGGTAGCCTCTCCAGAACTGCTTGATCATTGCCTCGGAGAATTGGGAGGAAAAGTGGTCCTTGGTGCAATGGTGAATACCCGATGCAATCCTGTTACTGGTGCTTTTGAGTACAGACTAGAGACTGTGAACAATTCTCGCAATGAACTTGCAAGCAACATTTCTTCAGGCCTAAAGTATCCATCTGAAGTGACTCTTCTCCATGACTTGAGATACTTTTATAATTCCCTTCTTCATCCTCAGATGATGTTGAGCTATGATCCAGGGGAGACAAGGGCAATTGCCATGAGCTCTGCTCAGAAACTTATTGACTGCAAGCAGTTTGTAAAGGACTTTAAACCTGAGACATTGCCACTGACCAACCCGTCTAAGATACGCTTCTCATGTCAAATAGAACTAGAAGATGAATCTGAAGATTTTGCTGCACACCTTCCTCCAGAATTAGTTATACTCCCTGTAAATGCCACCATATCTGACCTCAAGCTTGAAGCAACAAATGCTTTTCAAGATGTATATGTCATGTTCAGAAAACTTCAAATTGATGAGCTACTTGGCTATAATGTCGATGATTCCTCCCAGGTCAAGCACTTGTCTGGATCTATGTTCAATGCAGTCCGGCTGCGAGGAAAATGCATTGGCAAGAATGGGTTGAGCAAATTCCAAATGGAACGGGGCACGGAGAGGTGGACTGTGGATTGCAGTTGTGGGGTCAAGGACGATGATGGCGAGAGAATGTTGGCTTGTGACATATGTGGAGTGTGGAGACACACAAGGTGCTGTGGTATTCATGACGCAGATCCTGTTCCTGCACAGTTTGTTTGTCCAAAGTGCCAAAACTGTGACCCCAAACCCAAACCCAATGGACCCTGCGAGGATGACATTGTGAATGTTTGA 2076 0.4682 MVVCGGKPLKRMKRRVTADFYDFLTFPSPSVAGEDFSGGPFRTNVRSFLSKHALLPPPSALFPHLMTWQILFRVGDLTDGPESSPAVVCLDVIEEDVVRSRSVYCDQCRVVGWSGHPVCGKRYHFIIKADGTSIGGYHKPCMCCGDILHLSESKCKSCNHVTTTDDVEDWVYHQLESTTHLLHGVVHSNGYGHLLRVNGREGGSKFLSGCHIMDFWDRLCQTLGVRKVSVMDVSKKYGLEYRLLHAITKGHPWYGHWGYQFGSGSYGLTHESYKSAAEFLSNMPLSAFLYPGQKCDSRVQDMISYYQSLSKNVLVNIRDLFCFVLGLIHDARKTAASKNVDDIIGKKRRVNATGVSSSWTKSDIECVEEAMLRVLRAVSGSNWVSWRALRGAVCKVASPELLDHCLGELGGKVVLGAMVNTRCNPVTGAFEYRLETVNNSRNELASNISSGLKYPSEVTLLHDLRYFYNSLLHPQMMLSYDPGETRAIAMSSAQKLIDCKQFVKDFKPETLPLTNPSKIRFSCQIELEDESEDFAAHLPPELVILPVNATISDLKLEATNAFQDVYVMFRKLQIDELLGYNVDDSSQVKHLSGSMFNAVRLRGKCIGKNGLSKFQMERGTERWTVDCSCGVKDDDGERMLACDICGVWRHTRCCGIHDADPVPAQFVCPKCQNCDPKPKPNGPCEDDIVNV 691
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr2g01229 691 CDD PHD_MMD1_like 626 671 - -
Accr2g01229 691 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 611 676 IPR013083 -
Accr2g01229 691 Pfam PHD-finger 627 674 IPR019787 -
Accr2g01229 691 SMART PHD_3 626 672 IPR001965 -
Accr2g01229 691 SUPERFAMILY FYVE/PHD zinc finger 616 673 IPR011011 -
Accr2g01229 691 PANTHER PHD FINGER PROTEIN MALE MEIOCYTE DEATH 1-RELATED 13 680 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr2g01229 Accr-Chr2 40718380 40723675 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr2g01229 84 680 PHD Transcription Factor Family AT5G22260 30.903 6.07e-90 293
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR PHD Accr2g01229 PHD 4.5e-07 CL0390
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr2g01229 K26271 - gmx:100818189 1054.28