Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr2g01228 ATGCCTGCCATTAAGAAGAATTCTGAGCAGACTCGGTTAGGTTCTGTATTCAACAAGTTGGTGAATGAGATAGGAGACCCTGTTGATTTTGAACTTCCAGCTTGGCTTCATAAGTGGAAGGCAGTGCCATACGTCTCTATAAAGCGCAATATATATGTCACAAAGAAGGTAAAGAGAAGGCTTGATGATGATGGCATATTCTGTTCTTGTACTACATCCCCTGGGTCTTCTAGTGTTTGTGGTAAATACTGTCACTGTGGGGTGCTTATGTCTAGCTGCTCTTCAGGCTGTAAATGTGGGAGTTCTTGTCTCAATAAACCATTTCAGCATCGACCTACAAAAAAGATGAAATTGGTTCAGACTGAGAAGTGTGGTTCTGGAATTGTGGCGGATGAAGATATCAAGCAAGGGGACTTTGTCATTGAATATGTTGGAGAAGTCATTGATGACAAAACATGTGAAGAAAGGCTTTGGAATATGAAACATCGTGGGGAGACGAACTTCTACTTATGTGAAATTAACAGAGATATGGTGATTGATGCAACATATAAGGGGAACAAATCAAGATATATAAATCATAGTTGCTGCCCCAATACAGAGATGCAGAAATGGTTAATTGATGGTGAAACAAGAATTGGCATATTTGCAACGCGTGACATAACGAAGGGCGAGCACCTTACTTATGATTATCAGTTTGTTCAATTTGGTGCAGATCAAGATTGCCACTGTGGTGCTGCTGCGTGCAGGCGTAAGCTGGGGGCCCGACCTACCAAGCCTAAAACATCATCAGATGCATATCAGGTTAATCAGAAAGGAGGTTTGCATATTGGACATTCTCATGCTAACGGTGCACCAAAGTACACGCACAATTGCATTAAAGAAGTTATCAGGATAAATCACCCGACAAAACAGAGGTGGTGTTTTGGGATGATAAAGCAGTTCGATAAATATTCCAAAAAACACACTATTATGTTTGAAGAAGGTGATGTTGACTTAATTAACTTGTCAGAAGTAGATTGGGAATTATTGAGATTGTGA 1038 0.4037 MPAIKKNSEQTRLGSVFNKLVNEIGDPVDFELPAWLHKWKAVPYVSIKRNIYVTKKVKRRLDDDGIFCSCTTSPGSSSVCGKYCHCGVLMSSCSSGCKCGSSCLNKPFQHRPTKKMKLVQTEKCGSGIVADEDIKQGDFVIEYVGEVIDDKTCEERLWNMKHRGETNFYLCEINRDMVIDATYKGNKSRYINHSCCPNTEMQKWLIDGETRIGIFATRDITKGEHLTYDYQFVQFGADQDCHCGAAACRRKLGARPTKPKTSSDAYQVNQKGGLHIGHSHANGAPKYTHNCIKEVIRINHPTKQRWCFGMIKQFDKYSKKHTIMFEEGDVDLINLSEVDWELLRL 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr2g01228 345 ProSiteProfiles Post-SET domain profile. 237 253 IPR003616 -
Accr2g01228 345 SMART set_7 114 237 IPR001214 GO:0005515
Accr2g01228 345 ProSiteProfiles SET domain profile. 114 231 IPR001214 GO:0005515
Accr2g01228 345 PANTHER SET DOMAIN PROTEINS 28 273 - -
Accr2g01228 345 FunFam Histone-lysine N-methyltransferase 30 270 - -
Accr2g01228 345 Pfam SET domain 125 230 IPR001214 GO:0005515
Accr2g01228 345 SMART PostSET_3 237 253 IPR003616 -
Accr2g01228 345 SUPERFAMILY SET domain 41 249 IPR046341 -
Accr2g01228 345 SMART shorttest3 63 113 IPR006560 GO:0005634|GO:0042054
Accr2g01228 345 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 37 299 IPR025787 -
Accr2g01228 345 ProSiteProfiles AWS domain profile. 63 112 IPR006560 GO:0005634|GO:0042054
Accr2g01228 345 CDD SET_ASHR3-like 115 253 - -
Accr2g01228 345 Gene3D SET domain 35 272 IPR046341 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr2g01228 Accr-Chr2 40706308 40710657 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr2g01228 87 252 C2H2 Transcription Factor Family AT2G23740 33.871 1.05e-22 97.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Accr2g01228 SET 3.9e-19 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr2g01228 - - jre:109005024 561.222