Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr2g01200 ATGGCCGAGAAATTTGATCGTTTTCTTCTTGAATCCTACATTGAAGACAATAAAAGAGTTCAATGGTGTCCCAGCATCCCTCATTGTGGGAATGCAATACGTGTTGAGGATGATCAATTATGTGAGGAGCTCTGGGCAAAGAAGTGTCGAGATGAATCAGAAACTGTTAATTGGATGGCAGATCATGCAAAACCTTGTCCAAACTGTTTTAATTACTATGGTTGCTGTCATACTTGA 237 0.3966 MAEKFDRFLLESYIEDNKRVQWCPSIPHCGNAIRVEDDQLCEELWAKKCRDESETVNWMADHAKPCPNCFNYYGCCHT 78
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr2g01200 78 Gene3D - 39 75 - -
Accr2g01200 78 Pfam IBR domain, a half RING-finger domain 3 72 IPR002867 GO:0008270
Accr2g01200 78 SMART ibrneu5 3 66 IPR002867 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr2g01200 Accr-Chr2 40269440 40269754 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr2g01200 1 69 ARIADNE family AT2G16090 60.000 9.89e-32 112
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr2g01200 K11968 - qsa:O6P43_030968 128.642