Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr2g01190 ATGGAGGATCCTGCGCCTGTGTTGTTTCGTACAGGCAGGCAGGGGAAGGACGTTAAGCTGTTTTTAGCTATGGCGCTGTTTTTGTTTCTCTGTTCGTTTGCTTCATCTCTCAACGACGAAGGACAAACATTAATGGCTATCAAGGCTTCTTTCAGCAATGCAGCGAATGCGTTGCTTGATTGGGATGGTGTACCAAATGACGACTTTTGTTCTTGGCGTGGAGTATACTGTGATCAGACAAGCGATACTGTGCTTACTCTGAATCTGTCAAGTTTAAACTTGGGCGGCGAAATATCACCAGCCATCGGTGAATTAAGAAGCTTGCAATCCATAGATCTCCAGGGGAATAAACTAAGGGGTCAAATTCCAGATGAAATTGGGGACTGTGTCTCACTTATCCATCTAGATTTGTCTGATAACCAGTTATATGGGGACTTGCCTTTCTCCCTATCAAAGCTAAAGCATCTAGAGTTTCTGAATTTGAAGAATAATCAGTTGACTGGTCCTATTCCATCAACATTATCCCAAATTCCTAACCTGAAAACGCTTGATCTTGCTCGAAACCGGCTCTCTGGTGAGATACCAAGATTGCTCTATTGGAATGAGGTCTTACAGTATCTAGGTTTGCGAGGGAACAATCTGACTGGAACTCTGTCCCCTGACATTTGTCAATTAACTGGTTTGTGGTATTTTGACGTGAGAGGCAATAATCTAATGGGCACAATACCTGAAAGCATTGGTAACTGTACAAGTTTTGAGATTTTGGATTTATCATATAATCAGATCAGTGGGGAAATTCCTTACAACATTGGATTTCTGCAAGTTGCAACTTTGTCTCTTCAAGGTAATAGGCTGACTGGGAAGATTCCAGAGGTGATTGGTCTGATGCAAGCTCTCGCTATTCTGGATTTGAGTGAGAATGAGCTGGTGGGACCTATCCCTCCAATGCTTGGCAATTTATCTTTTACCGGAAAGCTGTACCTTCATGGAAACTTGCTTTCTGGTCCTATTCCGCCAGAGCTTGGCAATATGTCTAAATTAAGTTATTTGCAGTTGAATGACAACCAATTAGTTGGTGAAATTCCTGTAGAACTTGGAAGGCTTGAACATTTGTTTGAATTGAATCTTGCCAACAATCATCTGGAGGGACCAATTCCACAGAACATCAGCTCATGCTCAGCCTTGAATCAGTTCAATGTGCATGGTAATCACTTGAGTGGATCCATTCCTCCGAGTTTTAGAACCCTCGAGAGTTTGACTTACCTAAATCTTTCTTCTAACAACTTCGAAAGGAGCTTACCTGTTGAACTGGGCCATATCATAAATCTTGATACACTGGATCTGTCAAGCAATAACTTTTCAGGTCCAGTTCCTTCATCTGTTGGTGACTTGGAGCATCTTTTGACCTTGAACCTGAGCCATAACCTTCTTGATGGTCCGTTGCCCGCTGAATTTGGGAATTTGAGAAGCATACAGATTATTGATATTTCATACAACAGTCTTTTGGGTAGTATCCCGGTGGAAATCGGTCAACTGCAGAACCTTGCATCTCTGATACTGAACGACAATAGTTTGCATGGGAGAATTCCAGATCAGCTAGCTAATTGCCTGAGTCTCTCCTCCTTAAATGTTTCATACAATAATTTATCTGGCACTATTCCACCAATGAAGAATTTTTCACGGTTTTCGGCTGACAGCTTCATTGGAAATCCATTATTATGTGGGAAAAAGTTGGGATCTTTTTGTGGTCCTCACATATCAAAATCCAGAGTGTTTTTTTCAACGGCTGCAGTCCTTTGTCTTGCACTGGGTATCATCGCAATATTGGTAGTGGCCATTATTGCTATTTATGGATCCAGCCAATCAAAGCAATTCATGAAAGGATTGAGCAGATCTGGAGAAGGTCCCCCCAAACTTGTAGTTCTTCATATGGATATGGCAATTCATACCTTGAATGATATATTGAGAGCTACTGAGAATCTCAGCGAGAAATATATCATTGGGTATGGTGCCTCTAGTACAGTGTACAAGTGTAATTTAGAAGGTTCTCGGCCAATCGCAATTAAGCGGCTTTACAACCAGCATCGACACAATTTGCAAGAATTTGAAACAGAACTTGATACTGTTGGCAGTATCAGACATAGAAACCTTGTCACTTTGCATGGTTATGCACTGACCCCCAATGGAAATCTCCTATTCTATGACTACATGGAGAATGGCTCTTTGTGGGATCTTCTTCATGGTTCCTTGAAGAAGGTAAAACTTGACTGGGAAACACGATTAAGGGTTGCTGTTGGTGCTGCTGAAGGACTTGCTTATCTCCATCATGATTGCAACCCTCGGATTATTCACAGGGATATTAAATCCTCAAATATTTTGCTGGATGAGAACTTTGAGCCTCATATTTCTGATTTTGGTATTGCAAAAAGCATATCAACAACAAGAACTCATGCGTCAACTTTTGTTCTTGGAACCATTGGGTATATTGATCCTGAGTATGCCCAGACTTCTCGGTTGAGTGAAAAATCTGATGTCTACAGCTTTGGCATTGTTCTACTAGAGCTACTAACTGGGAAGAAAGCAGTAGATAATGAGTCTAACTTGCTACAATTGATATTGTCCAAGGCAGATGACAACACAGTAATGGAAGCTGTGGATCCAGAGGTGTGTGTGACATGCTTGGATCTAACCCGTGTGAAGAAGACCTTTCAGCTTGCTCTGCTATGCACAAAAAAAAACCCTTCTGAGAGGCCTACTATGCATGAGGTTGCAAGAGTATTGGCGTCGCTACTTCCGACCCCGCCTAACAAGGTGTTCACTGCCCCGGCAAAGATGTCTGATTTTGCACAATTTTTGATAGACCAGGGACGATGTCAAAGGTTAGAGTTGGTGCAACCTTCGGAGATGCATCCAAGGACACCCCCTAAGTCCGAATCACATCATCTGAAGCAGCATCTTGTGCTGGATTTTTTAGGGACGAGGGACAGGGTTACCTAG 2997 0.4221 MEDPAPVLFRTGRQGKDVKLFLAMALFLFLCSFASSLNDEGQTLMAIKASFSNAANALLDWDGVPNDDFCSWRGVYCDQTSDTVLTLNLSSLNLGGEISPAIGELRSLQSIDLQGNKLRGQIPDEIGDCVSLIHLDLSDNQLYGDLPFSLSKLKHLEFLNLKNNQLTGPIPSTLSQIPNLKTLDLARNRLSGEIPRLLYWNEVLQYLGLRGNNLTGTLSPDICQLTGLWYFDVRGNNLMGTIPESIGNCTSFEILDLSYNQISGEIPYNIGFLQVATLSLQGNRLTGKIPEVIGLMQALAILDLSENELVGPIPPMLGNLSFTGKLYLHGNLLSGPIPPELGNMSKLSYLQLNDNQLVGEIPVELGRLEHLFELNLANNHLEGPIPQNISSCSALNQFNVHGNHLSGSIPPSFRTLESLTYLNLSSNNFERSLPVELGHIINLDTLDLSSNNFSGPVPSSVGDLEHLLTLNLSHNLLDGPLPAEFGNLRSIQIIDISYNSLLGSIPVEIGQLQNLASLILNDNSLHGRIPDQLANCLSLSSLNVSYNNLSGTIPPMKNFSRFSADSFIGNPLLCGKKLGSFCGPHISKSRVFFSTAAVLCLALGIIAILVVAIIAIYGSSQSKQFMKGLSRSGEGPPKLVVLHMDMAIHTLNDILRATENLSEKYIIGYGASSTVYKCNLEGSRPIAIKRLYNQHRHNLQEFETELDTVGSIRHRNLVTLHGYALTPNGNLLFYDYMENGSLWDLLHGSLKKVKLDWETRLRVAVGAAEGLAYLHHDCNPRIIHRDIKSSNILLDENFEPHISDFGIAKSISTTRTHASTFVLGTIGYIDPEYAQTSRLSEKSDVYSFGIVLLELLTGKKAVDNESNLLQLILSKADDNTVMEAVDPEVCVTCLDLTRVKKTFQLALLCTKKNPSERPTMHEVARVLASLLPTPPNKVFTAPAKMSDFAQFLIDQGRCQRLELVQPSEMHPRTPPKSESHHLKQHLVLDFLGTRDRVT 998
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr2g01190 998 SMART LRR_typ_2 464 487 IPR003591 -
Accr2g01190 998 SMART LRR_typ_2 416 440 IPR003591 -
Accr2g01190 998 SMART LRR_typ_2 296 320 IPR003591 -
Accr2g01190 998 SMART LRR_typ_2 368 392 IPR003591 -
Accr2g01190 998 SMART LRR_typ_2 512 536 IPR003591 -
Accr2g01190 998 SMART LRR_typ_2 153 176 IPR003591 -
Accr2g01190 998 SMART LRR_typ_2 105 129 IPR003591 -
Accr2g01190 998 SMART LRR_typ_2 177 201 IPR003591 -
Accr2g01190 998 SMART LRR_typ_2 225 249 IPR003591 -
Accr2g01190 998 Pfam Leucine rich repeat N-terminal domain 38 78 IPR013210 -
Accr2g01190 998 SUPERFAMILY Protein kinase-like (PK-like) 640 927 IPR011009 -
Accr2g01190 998 SMART serkin_6 661 931 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr2g01190 998 FunFam LRR receptor-like serine/threonine-protein kinase ERL1 312 585 - -
Accr2g01190 998 FunFam LRR receptor-like serine/threonine-protein kinase ERL1 202 311 - -
Accr2g01190 998 Pfam Protein kinase domain 664 924 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr2g01190 998 SUPERFAMILY L domain-like 321 578 - -
Accr2g01190 998 ProSiteProfiles Protein kinase domain profile. 661 931 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr2g01190 998 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 632 736 - -
Accr2g01190 998 Gene3D Ribonuclease Inhibitor 313 585 IPR032675 -
Accr2g01190 998 Gene3D Ribonuclease Inhibitor 201 312 IPR032675 -
Accr2g01190 998 Gene3D Ribonuclease Inhibitor 37 200 IPR032675 -
Accr2g01190 998 SUPERFAMILY L domain-like 37 334 - -
Accr2g01190 998 FunFam LRR receptor-like serine/threonine-protein kinase ERL1 37 201 - -
Accr2g01190 998 Pfam Leucine rich repeat 442 501 IPR001611 GO:0005515
Accr2g01190 998 ProSitePatterns Protein kinases ATP-binding region signature. 667 689 IPR017441 GO:0005524
Accr2g01190 998 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 176 929 - -
Accr2g01190 998 Gene3D Phosphorylase Kinase; domain 1 630 736 - -
Accr2g01190 998 Pfam Leucine Rich repeat 248 265 IPR001611 GO:0005515
Accr2g01190 998 ProSiteProfiles Leucine-rich repeat profile. 179 201 IPR001611 GO:0005515
Accr2g01190 998 Gene3D Transferase(Phosphotransferase) domain 1 737 939 - -
Accr2g01190 998 ProSitePatterns Serine/Threonine protein kinases active-site signature. 782 794 IPR008271 GO:0004672|GO:0006468
Accr2g01190 998 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 737 937 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr2g01190 Accr-Chr2 39943483 39952442 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr2g01190 107 931 Receptor kinase-like Gene Family AT5G07180 77.697 0.0 1308
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XIIIb Accr2g01190 Pkinase 1.6e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr2g01190 K20718 - gmx:100811653 1491.09