Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr2g01178 ATGATCTCCCGGAAATTCTCCGTGTCACCGTCGTCCCTGGTTGTTTCTGATCCATACCCACCTGCTATTTCTCCGAATCAGCTACATCCCTCTTTCAAGTACCAGAAAAGCCACCATCTTTTGCCTCCGTTGGTTGCTTCCGCCGCCTCTCTATGTTCCTTCTTTCTTCTCTTTTCCCTCTGTTTTCGTCGACTCGCTAGAAAACGCACAACCCCTTCTTCTGATTCTGAGTCTAAGCCTCCTTATCGTTTCTCGTACTCCCTCCTCCGCCGTGCCACGTCATCCTTCTCCAACCGCCTCGGCCAAGGCGGATTCGGCCCTGTGTACTCCGGCACTCTGCCGCCGACCCGACAACCTGTCGCCATCAAGCTCATGGACTCTGCCTCTCTCCAGGGCGAGCGCGAGTTTCACAACGAGCTCTTCTTCGCGTCCAGGCTTCACTCTCAGCACGTGGTCTCTGCCATCGGCTTTTCGTCCGACATAAATCGCCGGAGGTTCTTGCTTGTCTACGAGTTGATGCATAATGGGAATCTGCAAGACGCGCTCTTGCACCGCAAGTGCCCTGAGTTGCTGGATTGGAAGAAGCGGTTTTCCATCATCGTCGACATAGTCAAAGGGATTCAGTATCTTCATTCTTGCGACCCACCCGTGATTCACGGCGATATCAAGCCCAGTAATATTCTATTAGACAGTTCTTTGTCGGCGAGAATTGGGGATTTCGGTCTTGCACGGCTGAAATCGGAACCCCAGATTGAAATTGACATTTTGAAGTCAGACGGTATTGAAATGAAGAATAGTGGATTGGAATTAGAAGAAGAGAAGAAGGGAAAGGAAGAAGAATTAGAGAGCAATGGTGGGTCAATGCTTGAGGAAACACAGAGCGTGAATACGGTTGATGAAGGTAGCTTAGCTGCAGAGCAATCTCCTGAGGGTTTTGTCACGATACCCATATCGGAGCCGTCCCCAGAGCTGGCGGAGGAGGCGGCAGCTGCACCGTCACCTTCAGAGGCGAATTTTGACAAAATTAGCGTTCAGAGTGAATTAAACATTTCCTTGAGTTGTAAGAAAAATGGGAAAGTCTTAAAGAGCAATTCCATGAAGGATTGGTGGTGGAAGCAAGACATCGAAGGAGCAAAAACATCATCTCCCATGGGTGAGAATAAGAAAGTGAAGGATTATGTAATGGAATGGCTTGGAAAAGAAATAAGTAAAGAGAGACCCAAGAGCGAATGGGTTGCATCAGAAGCAGCAGCGACCTCTAGTAGTGTCACAACAATGGAAAAAACAGAGAAAAAGAAGAGCAAGAGGCGCGTGGAATGGTGGAGATCAATGGATGAGGAAGCCATTAAACCTAAAACTTTAAAGAAGGAGAAGAAAAGACCACCGAGAGAATGGTGGAAAGAGGAGTACTGTGAAGAGCTTGCCAAGAAGAAGAAAAAGAAGAAACAGCAACAAAAGAGACATGGAATAAACAATAATGATGATTGGTGGGTAAGAGAAGCAGAAGACTTATATGGAGAAAGAAAAAAGGCCAAAACCCAAAAAAGCAGCCGCGGTAATATAGATTCATGGTTAGATGGATTCAATGGTGAGTTATTCAGAGCTAGAAGGAACAGCCATGATTCTGCAGCTAGCTGGGAAATTCCCAAGAGTGGTGGTGTTAGTAGCACACCAAGCATGAGAGGAACAGTTTGTTATGTTGCTCCTGAGTATGGTTTTGGTGAAGATTTATCAGAGAAGTGTGATGTATATAGTTTTGGGGTATTATTACTTGTTATAGTTTCTGGCCGACGGCCACTTCAAGTGACTGGTTCGCCATTATCAGAGTTTCATAAAGCAAATTTGCTGTCATGGGCACGCCATTGTGCGCGCCATGGGAAGCTGCTTGATCTGGTTGATCAGTCTATTAAGTCATTAGATAAAGATCAAGCCGTTCTATGCATTACAATTGCTCTTCTTTGTTTGCTCAAGAATCCGTCTCGTCGTCCTTCTATGAAAGAGATATTGGGAATGCTTAGTGGTGAACTTGAGCCACCGCAATTGCCAGTTGAGTATTCACCATCAACCCCATCTCGGTTCCGAACCAAGGCTCGCAAAAAGGGTCTGTGA 2109 0.4642 MISRKFSVSPSSLVVSDPYPPAISPNQLHPSFKYQKSHHLLPPLVASAASLCSFFLLFSLCFRRLARKRTTPSSDSESKPPYRFSYSLLRRATSSFSNRLGQGGFGPVYSGTLPPTRQPVAIKLMDSASLQGEREFHNELFFASRLHSQHVVSAIGFSSDINRRRFLLVYELMHNGNLQDALLHRKCPELLDWKKRFSIIVDIVKGIQYLHSCDPPVIHGDIKPSNILLDSSLSARIGDFGLARLKSEPQIEIDILKSDGIEMKNSGLELEEEKKGKEEELESNGGSMLEETQSVNTVDEGSLAAEQSPEGFVTIPISEPSPELAEEAAAAPSPSEANFDKISVQSELNISLSCKKNGKVLKSNSMKDWWWKQDIEGAKTSSPMGENKKVKDYVMEWLGKEISKERPKSEWVASEAAATSSSVTTMEKTEKKKSKRRVEWWRSMDEEAIKPKTLKKEKKRPPREWWKEEYCEELAKKKKKKKQQQKRHGINNNDDWWVREAEDLYGERKKAKTQKSSRGNIDSWLDGFNGELFRARRNSHDSAASWEIPKSGGVSSTPSMRGTVCYVAPEYGFGEDLSEKCDVYSFGVLLLVIVSGRRPLQVTGSPLSEFHKANLLSWARHCARHGKLLDLVDQSIKSLDKDQAVLCITIALLCLLKNPSRRPSMKEILGMLSGELEPPQLPVEYSPSTPSRFRTKARKKGL 702
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr2g01178 702 ProSitePatterns Serine/Threonine protein kinases active-site signature. 217 229 IPR008271 GO:0004672|GO:0006468
Accr2g01178 702 SUPERFAMILY Protein kinase-like (PK-like) 71 690 IPR011009 -
Accr2g01178 702 MobiDBLite consensus disorder prediction 266 288 - -
Accr2g01178 702 Coils Coil 467 487 - -
Accr2g01178 702 Gene3D Transferase(Phosphotransferase) domain 1 535 679 - -
Accr2g01178 702 Gene3D Transferase(Phosphotransferase) domain 1 173 266 - -
Accr2g01178 702 MobiDBLite consensus disorder prediction 266 284 - -
Accr2g01178 702 Pfam Protein tyrosine and serine/threonine kinase 96 246 IPR001245 GO:0004672|GO:0006468
Accr2g01178 702 Pfam Protein tyrosine and serine/threonine kinase 558 670 IPR001245 GO:0004672|GO:0006468
Accr2g01178 702 SMART serkin_6 94 672 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr2g01178 702 ProSiteProfiles Protein kinase domain profile. 94 681 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr2g01178 702 Gene3D Phosphorylase Kinase; domain 1 82 172 - -
Accr2g01178 702 MobiDBLite consensus disorder prediction 677 702 - -
Accr2g01178 702 PANTHER OS07G0586332 PROTEIN 30 700 IPR044576 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr2g01178 Accr-Chr2 39682500 39684608 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr2g01178 550 669 Receptor kinase-like Gene Family AT3G58690 34.400 3.59e-11 63.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XI Accr2g01178 PK_Tyr_Ser-Thr 2e-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr2g01178 - - qsa:O6P43_005511 776.163