Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr2g01177 ATGTTTCCTTTACAACGAGGAAATGAGCTGGTAATCCAGTTTTCAAGGAGTCCCAATACTCAGAACCAAGAAAGCAAGATCTCATCCGAAGATCCGATTCTGAAGGATGATTATGATTCTCATCGAGTCAGCAATTCTGATCATAAAGGAATAATTGGCAACACCTCAACAGAGAACAACATACACTGTCGAGCTGCTAGTAGCAGTAATATGAATAATCCAAACGAAAACAAGAAGAAGAAGACGATTCACAGAGAGATTGAGAGGCAAAGGAGGCAAGAAATGGCTTCCCTTTATGCTTCCCTCAGATCCCTTCTTCCTCTTGAGTACATCAAGGGAAAGAGATCGATATCAGATCATATGAATGAGGCAGTGACTTATATAAAGCATTTACAGAATAATATTAAAGAACTTGGTGCTAAGAGGGATTTACTGAAGAAGCACTCAGATAATTATTCTAACTTGGAAACCCCTAATGATGATGAGAGCAAACAGAAATCGATAAACTTTACTGTCCATGAGAATAATGATGTTGTGGGAATTGAAATTATCAGTAACTTCAAAGATGAAAGGTTCTTACTCTCAAAGTTTCTGGAATTTCTGCTTGAAGAAGGACTTGAAGTTGTTACTTGTCACTCTACCCAAGTCAATGGTAGAATACTTCATAGTATCAACTGTCGGGTTAACAGTTCCAGTAGTCTAGATCTAACTGAGCTGAGCAGGAAAATTGCAAGTTTCAATTCTTAG 747 0.3788 MFPLQRGNELVIQFSRSPNTQNQESKISSEDPILKDDYDSHRVSNSDHKGIIGNTSTENNIHCRAASSSNMNNPNENKKKKTIHREIERQRRQEMASLYASLRSLLPLEYIKGKRSISDHMNEAVTYIKHLQNNIKELGAKRDLLKKHSDNYSNLETPNDDESKQKSINFTVHENNDVVGIEIISNFKDERFLLSKFLEFLLEEGLEVVTCHSTQVNGRILHSINCRVNSSSSLDLTELSRKIASFNS 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr2g01177 248 Gene3D - 70 158 IPR036638 GO:0046983
Accr2g01177 248 SMART finulus 85 137 IPR011598 GO:0046983
Accr2g01177 248 CDD bHLH_AtORG2_like 84 147 - -
Accr2g01177 248 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 78 149 IPR036638 GO:0046983
Accr2g01177 248 MobiDBLite consensus disorder prediction 13 28 - -
Accr2g01177 248 Pfam Helix-loop-helix DNA-binding domain 80 132 IPR011598 GO:0046983
Accr2g01177 248 FunFam Transcription factor bHLH126 71 159 - -
Accr2g01177 248 Coils Coil 128 148 - -
Accr2g01177 248 PANTHER ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATED 67 242 - -
Accr2g01177 248 MobiDBLite consensus disorder prediction 13 35 - -
Accr2g01177 248 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 79 131 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr2g01177 Accr-Chr2 39651283 39652594 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr2g01177 84 244 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G25410 45.181 1.46e-38 132
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Accr2g01177 HLH 3.2e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr2g01177 - - gmx:100780888 248.44