Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr2g01176 ATGCCCTCGAAATTTTTCTGTTGTTTCTGTGGTTTCCTCCCAAAAGAAGAACACCAGCAAGCCAAAACAGGAAGTGACGGCAAAAATAGGGACTATTCATGGGAAATGTACACGGTGAAGGAGTTGCTTCGTGCAACAAACAATTTCCATCAAGATAACAAGATAGGGGAGGGTGGTTTTGGAAGCGTTTATTGGGGTCGAACAAGTAAAGGCATCGAGATTGCAGTGAAGAGACTGAAGACGATGACGGCGAAGTCAGAGATGGAATTTGCAGTGGAAGTAGAAGTACTTGGAAGGGTGAGGCATAAGAACTTGTTAGGTCTAAGAGGATTCTACGCTGGAGGAGAAGAAAGACTTATTGTTTACGATTTCATGCCCAATCATAGCTTGCTCACTCATCTTCATGGCCAGCTCTCTTCTTCTTGTCAGCTAGATTGGCCTAAAAGAATGAGCATCGCCATCGGAGCAGCTGAAGGCTTAGCGTATCTGCACCATGAGGCGAATCCTCACATTATACATAGAGACATAAAGGCAAGCAACGTTCTTTTGGACTCTGAATTTCAAGCCAAAGTGGCTGATTTTGGGTTTGCAAAGCTAATACCAGAAGGCGTGAGCCATCTGACTACAAGAGTCAAAGGAACTTTGGGATATCTGGCGCCAGAATACGCCATGTGGGGTAAGGTTTCAGAGAGCTGTGATGTGTATAGCTTTGGGATTTTGCTTTTGGAGATCATAAGCGCGAAAAAGCCGATAGAGAAGCTTCCGGGAGGAGTGAAAAGGGACATAGTTCAGTGGGTGACACCTTATGTTCAAAAGGGTATAGTCAATCATATTGCAGATCCAAAGTTGAAGGGTAAGTTTGACATGGAGCAGTTGAAATCTGTGGTGATGCTGGCTATTAAGTGCACCACTAGTAGCCCGGAGAAGCGGCCGAGTATGGCAGAGGTGGTGGAGTGGCTCAAGGAAAGTGGCGGTGGTGGCGTTGGGAGGAGGAGGGAGGAGATTCCGGCGGCTCTGAGGGACAAGCATGGTGATGAAGAAAACGACAAGAATGATAAGGACTGTGAAGACATGGGAAAGAGGCAATCCATGTTGAGGATACCAAGCGATAGATATAAAATAAGATGA 1128 0.4592 MPSKFFCCFCGFLPKEEHQQAKTGSDGKNRDYSWEMYTVKELLRATNNFHQDNKIGEGGFGSVYWGRTSKGIEIAVKRLKTMTAKSEMEFAVEVEVLGRVRHKNLLGLRGFYAGGEERLIVYDFMPNHSLLTHLHGQLSSSCQLDWPKRMSIAIGAAEGLAYLHHEANPHIIHRDIKASNVLLDSEFQAKVADFGFAKLIPEGVSHLTTRVKGTLGYLAPEYAMWGKVSESCDVYSFGILLLEIISAKKPIEKLPGGVKRDIVQWVTPYVQKGIVNHIADPKLKGKFDMEQLKSVVMLAIKCTTSSPEKRPSMAEVVEWLKESGGGGVGRRREEIPAALRDKHGDEENDKNDKDCEDMGKRQSMLRIPSDRYKIR 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr2g01176 375 Pfam Protein kinase domain 49 318 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr2g01176 375 Gene3D Phosphorylase Kinase; domain 1 13 124 - -
Accr2g01176 375 ProSitePatterns Serine/Threonine protein kinases active-site signature. 171 183 IPR008271 GO:0004672|GO:0006468
Accr2g01176 375 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 5 322 - -
Accr2g01176 375 FunFam PTI1-like tyrosine-protein kinase At3g15890 125 334 - -
Accr2g01176 375 SMART serkin_6 49 320 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr2g01176 375 FunFam PTI1-like tyrosine-protein kinase At3g15890 21 124 - -
Accr2g01176 375 SUPERFAMILY Protein kinase-like (PK-like) 31 322 IPR011009 -
Accr2g01176 375 Gene3D Transferase(Phosphotransferase) domain 1 125 325 - -
Accr2g01176 375 MobiDBLite consensus disorder prediction 325 375 - -
Accr2g01176 375 ProSitePatterns Protein kinases ATP-binding region signature. 55 77 IPR017441 GO:0005524
Accr2g01176 375 ProSiteProfiles Protein kinase domain profile. 49 320 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr2g01176 375 MobiDBLite consensus disorder prediction 323 375 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr2g01176 Accr-Chr2 39606337 39608094 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr2g01176 14 336 Receptor kinase-like Gene Family AT2G48010 42.121 3.05e-83 263
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XV Accr2g01176 Pkinase 4.2e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr2g01176 - - gmx:100817283 575.089