Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr2g01107 ATGGAGGGCCATGGTGATATGGGCCTTATTGGGGAATTTGATCATAGTTTGATGGGTAGGATGAGGGATGATGAGTATGAGAGTCGGTCTGGGAGTGATAATTTCGAAGGACTTTCCGGCGACGATCAGGATGGGGGTGGCGGCGGCGATGATCAGTCTAAGAGAAGAAAGAAATATCACAGGCACACTCCTCATCAAATTCAAGAGCTTGAAGCATTATTCAAGGAGTGTCCTCATCCAGATGAGAAGCAGAGGATGGAACTTAGTAAGAGGCTTGGCTTGGAGAATAAACAGATCAAGTTCTGGTTTCAAAATAGAAGAACTCAAATGAAGACTCAATTGGAACGCCATGAGAATATAATTCTGAGACAAGAGAATGAGAAACTCCGAGCTGAGAATAGTATGATAAAGGAAGCCATGGCCAACCCGATGTGTAACCAATGCGGTGGCCCGGCAATTCCAGGCCAAATTTCGTTTGAGGACCATCATCTCAGAATTGAAAATGCCCGGCTAAAGGATGAATTGAATCGAATATGTGTCTTGGCGAACAAGTTCTTGGGTAGGCCACTCTCATCCCTGGCCAGCCCCACAGCTATTATGGGTTTGAATTCTGGCCTTGAACTCGCTATTGGAAGGAGCGAAATTGGCGGCTCAAGCACTTTAGGCTCTTCCTTGCCAATGGGGCTTGACTTAGGGGAAGGTATTTTGGGCACGCCTTCGGCAATGCCCCGAATTAGATCGCCAATGGGAATGATGGGAGGTGAAATTCAGGTTGATAGGTCTATGCTCATCGATCTCGCGCTGTCTGCTATGGAGGAATTGATGAAGATGGCTCAGGCAGATAGCCCTCTCTGGATTAAGTGTTTGGGTGGTGAGAGAGAGATACTGGACCATGAGGAGTATGAAAGGATAATTTCTCCTTGTATCGGCCCGAAACATGCTGGTTTTGTAACAGAAGCTACAAGAGAAACTGGGATAGTCATCATAAACAGTCTAGCCCTCATGGAGACATTGATGGATGCAAACCGGTGGGCGGAGATGTTTCCCTCGTTGATAGCTAGAGCTGCTACCGTTGATGTAATATCAAATGGTATGGATGGAAGCAGAAATGGTGCTTTGCAAGTGATGCACGCAGAGGTTCAATTGCTTTCGCCACTTGTCCCTGTGCGTCAATTGAGATTTCTCCGGTTTTGCAAGCAGCATACAGAAGGTGTGTGGGCCTTAGTTGATGTTTCGGTTGAGATTGGCCACAGTTCAATCAATGGCCACCCGTACGTGAGCTGTAGGAGGCTTCCTTCGGGCTGTGTCGTGCAAGATATGCCCAATGGTTACTCCAAGGTCACATGGGTTGAACATACACAATACGATGAAAGTGCCATTCACCAACTGTACCGGCCAATTGTTAATTCCGGCTTCGGCTTTGGCGCTCATAGGTGGATTGCCACCCTTCAGAGGCAGTGTGAATGCTTGGCAATCCTCATGTCCTCTTCTATACCCAGTGAGGACCATACAGCATTAAGCCAAGCTGGTAGGAGAAGCTTGTTGAAGCTGGCGCAGCGCATGACCAATAACTTCTGTTGCGGGGTTTGTTTATCGTCGGCGCGCAAGTGGGATGGCCTCCATATTGGCACGCTCGGCGATGATGTGAAGGTGATGACGAGGAAGAACATGGATGATCCTGGGGAGCCTCCCGGAATCGTGCTAAGCGCAGCGACTTCTGTTTGGATCCCAGTGTCCCGGGAGAGCCTGTTCAACTTCCTGCGTGATGAACACCTGAGAAGCGAGTGGGACATTTTGTCGAATGGGGGACCGATGCAGGAGATGGTACATATTGCCAAAGGTCAAGGTTCTGGAAATTGTGTCTCTCTCCTTCGTGCCAGCGCTGTGAATCCCAACGAAAGCAATATGGTAATTCTACAAGAGACATGGACGGACCCGTCGTGCTCGGTGGTAGTGTATGCTCCTGTTGACGTTCAATCCTTGAACGTGGTAATGAGTGGCGGAGACTCCGCCTATGTAGCCCTTTTGCCCTCAGGGTTCGCCATCCTCCCCGACGGCCACCACGCCAGCTTTGGCAGCGGTCTACTCAAAGGTGGCAACAGCCCCGACGGAGGTGGTGATCGCCAGGGATGCCTCCTCACTGTGGGGTTCCAGATTCTTGTAAACAGCCTGCCAACGGCAAAACTCACGGTGGAGTCCGTCGAGACAGTGAGCAACCTCATTGCCTGCACTATACAGAAGATCAAAAGCGCACTGCCAGTTGCATGA 2268 0.4982 MEGHGDMGLIGEFDHSLMGRMRDDEYESRSGSDNFEGLSGDDQDGGGGGDDQSKRRKKYHRHTPHQIQELEALFKECPHPDEKQRMELSKRLGLENKQIKFWFQNRRTQMKTQLERHENIILRQENEKLRAENSMIKEAMANPMCNQCGGPAIPGQISFEDHHLRIENARLKDELNRICVLANKFLGRPLSSLASPTAIMGLNSGLELAIGRSEIGGSSTLGSSLPMGLDLGEGILGTPSAMPRIRSPMGMMGGEIQVDRSMLIDLALSAMEELMKMAQADSPLWIKCLGGEREILDHEEYERIISPCIGPKHAGFVTEATRETGIVIINSLALMETLMDANRWAEMFPSLIARAATVDVISNGMDGSRNGALQVMHAEVQLLSPLVPVRQLRFLRFCKQHTEGVWALVDVSVEIGHSSINGHPYVSCRRLPSGCVVQDMPNGYSKVTWVEHTQYDESAIHQLYRPIVNSGFGFGAHRWIATLQRQCECLAILMSSSIPSEDHTALSQAGRRSLLKLAQRMTNNFCCGVCLSSARKWDGLHIGTLGDDVKVMTRKNMDDPGEPPGIVLSAATSVWIPVSRESLFNFLRDEHLRSEWDILSNGGPMQEMVHIAKGQGSGNCVSLLRASAVNPNESNMVILQETWTDPSCSVVVYAPVDVQSLNVVMSGGDSAYVALLPSGFAILPDGHHASFGSGLLKGGNSPDGGGDRQGCLLTVGFQILVNSLPTAKLTVESVETVSNLIACTIQKIKSALPVA 755
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr2g01107 755 SMART START_1 265 489 IPR002913 GO:0008289
Accr2g01107 755 FunFam Homeobox-leucine zipper protein GLABRA 2 265 488 - -
Accr2g01107 755 Gene3D - 48 129 - -
Accr2g01107 755 Pfam Homeodomain 56 111 IPR001356 GO:0003677
Accr2g01107 755 Pfam START domain 266 489 IPR002913 GO:0008289
Accr2g01107 755 ProSiteProfiles 'Homeobox' domain profile. 53 113 IPR001356 GO:0003677
Accr2g01107 755 MobiDBLite consensus disorder prediction 16 31 - -
Accr2g01107 755 FunFam Homeobox-leucine zipper protein HDG1 41 129 - -
Accr2g01107 755 SUPERFAMILY Homeodomain-like 39 113 IPR009057 -
Accr2g01107 755 CDD homeodomain 56 113 IPR001356 GO:0003677
Accr2g01107 755 ProSiteProfiles START domain profile. 256 492 IPR002913 GO:0008289
Accr2g01107 755 MobiDBLite consensus disorder prediction 1 63 - -
Accr2g01107 755 Coils Coil 107 142 - -
Accr2g01107 755 SUPERFAMILY Bet v1-like 536 749 - -
Accr2g01107 755 SMART HOX_1 55 117 IPR001356 GO:0003677
Accr2g01107 755 ProSitePatterns 'Homeobox' domain signature. 88 111 IPR017970 GO:0000981|GO:0006355
Accr2g01107 755 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 54 752 IPR042160 -
Accr2g01107 755 CDD START_ArGLABRA2_like 260 488 - -
Accr2g01107 755 SUPERFAMILY Bet v1-like 258 489 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr2g01107 Accr-Chr2 36966371 36971756 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr2g01107 1 752 Homeobox Transcription Factor Family AT3G61150 58.571 0.0 884
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Accr2g01107 START 6.6e-49 CL0209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr2g01107 K09338 - gmx:100785102 1238.4