Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr2g01096 ATGGCTCCGGCGCCGGTGGATAACAAAGGCGAGTCCTCGGCCGGTGAGTCTCAGAGATCTATTCCGACGCCTTTCTTAACCAAAACTTATCACCTTGTGGACGATCACACCATAGACGATGTTATATCCTGGAACGAAGATGGATCCAGTTTCATCGTTTGGAATCCTACGGTTTTCGCCCGAGATTTGCTTCCTAAATATTTTAAGCACAACAACTTCTCTAGCTTCGTCCGCCAACTTAACACCTATGGGTTCAGAAAAGTAGTTCCCGATCGCTGGGAATTCACAAACGAGTTTTTTCGCAGAGGCAAGAAACAACTTCTGCGCGAAATTCAGCGTCGGAAAATCTCATCGCCTTCGGCAACATCAGCTGGTGCAACTACGGTAGCGTCAGTTCCGGCAACGCCGCCATTGACGGCAATTCCAACGGCGAAGCCTATCATATCGCCTTCTAACTCGGGGGAAGAACAGGTCATTTCGTCGAATTCATCGCAGACCGGAGCTCCGGCGGAACTCTTAAACGAGAACGAGAGGCTGAGAAAAGAAAACGTTCAGCTTAGCAAGCAATTAGCAGAGATGAGATCTCTGTGTAACAACATATTCAATCTAATGTCAAAATACGCAAATAGCCAAAATATCAGTTTGCAATGTACAGCGAGTGACTTCACCGCCGTGAAACCACTCGATTTGATGCCGGCCGCGCAGAACTCCGGTGACCTGGACACGGTGGCGATGGTGGAAGACGAAAGGAATCCGAAGCTGTTCGGGGTGGCGATCGGTACGAAGCGATCACGGGAAGGTGGAGGAGGTGGTGATCCGGTGCTAACCTTGCACAGAGCGGGGCCTACAGAGATGAAATCAGAGCCGTTGGGTTGCCAGCGGCGTCGAGATCATCAGGCAGCGCCGTGGCTGAATCAATGCCGTCACACGAATCAGAGAGTTTATAATTAA 951 0.5026 MAPAPVDNKGESSAGESQRSIPTPFLTKTYHLVDDHTIDDVISWNEDGSSFIVWNPTVFARDLLPKYFKHNNFSSFVRQLNTYGFRKVVPDRWEFTNEFFRRGKKQLLREIQRRKISSPSATSAGATTVASVPATPPLTAIPTAKPIISPSNSGEEQVISSNSSQTGAPAELLNENERLRKENVQLSKQLAEMRSLCNNIFNLMSKYANSQNISLQCTASDFTAVKPLDLMPAAQNSGDLDTVAMVEDERNPKLFGVAIGTKRSREGGGGGDPVLTLHRAGPTEMKSEPLGCQRRRDHQAAPWLNQCRHTNQRVYN 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr2g01096 316 ProSitePatterns HSF-type DNA-binding domain signature. 64 88 IPR000232 GO:0003700|GO:0006355|GO:0043565
Accr2g01096 316 MobiDBLite consensus disorder prediction 1 21 - -
Accr2g01096 316 FunFam Heat stress transcription factor B-4 17 115 - -
Accr2g01096 316 MobiDBLite consensus disorder prediction 146 171 - -
Accr2g01096 316 Coils Coil 176 196 - -
Accr2g01096 316 SMART hsfneu3 21 114 IPR000232 GO:0003700|GO:0006355|GO:0043565
Accr2g01096 316 Gene3D - 17 115 IPR036388 -
Accr2g01096 316 MobiDBLite consensus disorder prediction 146 174 - -
Accr2g01096 316 PRINTS Heat shock factor (HSF) domain signature 63 75 IPR000232 GO:0003700|GO:0006355|GO:0043565
Accr2g01096 316 PRINTS Heat shock factor (HSF) domain signature 25 48 IPR000232 GO:0003700|GO:0006355|GO:0043565
Accr2g01096 316 PRINTS Heat shock factor (HSF) domain signature 76 88 IPR000232 GO:0003700|GO:0006355|GO:0043565
Accr2g01096 316 Pfam HSF-type DNA-binding 25 114 IPR000232 GO:0003700|GO:0006355|GO:0043565
Accr2g01096 316 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 14 257 IPR027725 -
Accr2g01096 316 SUPERFAMILY "Winged helix" DNA-binding domain 22 114 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr2g01096 Accr-Chr2 36810648 36811693 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr2g01096 1 316 HSF AT5G62020 48.949 3.34e-92 275
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Accr2g01096 HSF_DNA-bind 1.8e-32 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr2g01096 K09419 - gmx:100817440 377.481