Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr2g01091 ATGATTCAAACCATTCGATTCCATTTTAGCATACTCACATGGGTTCAACTGATTTCCCTGATATTCGTGCTAGGCGCCACCGCGCAATCCGCCGTGCAGCCGGTGCCGACCTTCGCATCCCGGCAGCAGTGGGACCCTTCAATTGCTGCCATGGTGGGTGCCCTGTTCTGCGCCTTCCTTTTCATGGGCTTCTTCTCTGTCTACCTCCGCCATTGCGCTGAGGAGGAAGCCGCCGCCCGCCCGGCCGGAGACTGGTCTTGCTCGTGCTCAGAGGGCATTGATCAGAAAGTCCTGGACACGTTCCCCGTTCTCGTTTATTCCACCATCAAGGACCTTAAAATGGGTAAAGGAGCGCTTGAATGTGCAGTGTGCTTGAACGAGTTCAAAGATAACGAAACTCTCCGATTACTTCCCAAATGCAACCACGTGTTCCATCCTTCTTGTATCGAAGCTTGGCTCTCTTCTCACGTGACTTGTCCTGTTTGCCGGGAAAAGCTAACTCCAGATTACGATCAAGTGGCCATAACGGTTCCTCCACAATTGAACGTTATGGAGAGTAATGATAATAATCGCAGAGGTGAAAATGAGGAAGAAGGAAAAGATGAGAGACCTGAAGAAAGGAGTGGTGAGAACAGCGGCGATGGTGGTGGTGAGGTTGAGGACGGTGCGGAAGCCGTCGGAGGAGATCGGAGGTTGACGGTGTTAAGGAAGTCGAATTCGACGGGTCATTGTGAGGTGGAGAGGTATACGCTGAAGTTGCCGGAGGATGTTCGGAATTATATTCTGGTGAACCATCACGGGACGATGATGCGGCGGTCGGCGAGTTATAACGTGGGAATGTTCATGGGAGGGAGTCCGAGGAAAGGGTTGTGTTGGAATGAGAAGGAGGTTATCGAGAAGGATAAGGAAGATCTTGTTCATCCTCCATTATCATTGGTTCCTTGA 945 0.5122 MIQTIRFHFSILTWVQLISLIFVLGATAQSAVQPVPTFASRQQWDPSIAAMVGALFCAFLFMGFFSVYLRHCAEEEAAARPAGDWSCSCSEGIDQKVLDTFPVLVYSTIKDLKMGKGALECAVCLNEFKDNETLRLLPKCNHVFHPSCIEAWLSSHVTCPVCREKLTPDYDQVAITVPPQLNVMESNDNNRRGENEEEGKDERPEERSGENSGDGGGEVEDGAEAVGGDRRLTVLRKSNSTGHCEVERYTLKLPEDVRNYILVNHHGTMMRRSASYNVGMFMGGSPRKGLCWNEKEVIEKDKEDLVHPPLSLVP 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr2g01091 314 Pfam Ring finger domain 120 163 IPR001841 -
Accr2g01091 314 CDD RING-H2_EL5-like 120 163 - -
Accr2g01091 314 SUPERFAMILY RING/U-box 120 172 - -
Accr2g01091 314 FunFam E3 ubiquitin-protein ligase ATL6 84 169 - -
Accr2g01091 314 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 94 171 IPR013083 -
Accr2g01091 314 ProSiteProfiles Zinc finger RING-type profile. 121 163 IPR001841 -
Accr2g01091 314 MobiDBLite consensus disorder prediction 177 234 - -
Accr2g01091 314 SMART ring_2 121 162 IPR001841 -
Accr2g01091 314 MobiDBLite consensus disorder prediction 189 214 - -
Accr2g01091 314 PANTHER RING FINGER DOMAIN-CONTAINING 38 166 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr2g01091 Accr-Chr2 36671271 36672215 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr2g01091 12 289 Rapid Response to Elicitors AT3G05200 37.217 9.17e-51 171
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr2g01091 K10664 - qsa:O6P43_030504 198.364