LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Accr2g01023	ATGAAGACCAAACTTCGTCTTCTTCATCCAAACATGAGCGAACTTAGCACTTCTGCATCATTAAGGACCATCTTCTTCCTCTGTTTTCCCCTGCTTTTCCCTTTCATACTTGCTTCCTTTTACACTCCTGTTGATCTTTTAAGCATCAACTGCGGCAGCTCCGGCCACTCGTCGGGAAATGATCGGACATGGACCGGAGACGTCGACTCAAAGTTCTTACACAGAGAAGGCGAATCTATAGTAGCTACAGCACTTACTCAATCTCCTTCCACTCAGCAAGTGCCATACACCACAGCTCGTCTCTCTCGCTCTCAATTTTCCTATTCATTCCCTGTCTCTCCAGGCCAGAAATTCCTCCGCCTGTTCTTCTACCCAGCTTCATACCCAGGTTTTGATCGTTTTAATGCCTTCTTCACTGTCAAATCTGGCGGGTTCACACTCCTTAAGGATTTCAATGCTTCGGTCACCGCCGATGCTAACAGTGTTGATACCATATTCAGAGAATATTGCGTCAGCATCGGCGATGGCGAGAGGCTCAATTTAACTTTCACTCCGAATTCAACAGACCCACATTCTTATGCGTTTGTTAATGGAATTGAGATTGTCTCCATGCCTGAGGATCTCTATTACACCAAACATGAAAGCTTAGGATTCAAATTAATTGGTTCGGCGGCCATGTTTAGCATCTCCGACAACGTTGCTCTTCAGACAGAGTACAGGCTAAACGTTGGTGGAAAACATATCTCAGCTCTGGAAGACACAGGAATGCTCCGATTTTGGGGCGTCGATGGTAGTTTCGTTGTTAAAACTTCTCTACCAACTGATTATGAAGGTTGGAGAAGACGCTTGATATTCAGTGAAGTTCCTAATTACACCGCACCTGAGCAAGTCTATCGAACAGAACGCGATATGGGAATGAATAAGACTCTAAACATGATTTCTAACCTTACTTGGGAGTTTCCTGTCAATTCTGGCTTTACTTACATGCTTAGACTCCATTTTTGTGAGCTTAATCCAGATATCAACATTTCCTACAACAGAATGTTTGATATTTACATAGCCGACCAGTTAGCTGAGGATGATGCAAATGTTCTCCACTGGGCCAAGGAAAAAGCAATTCCGGTATATAGAGACTATGCAGTAATTGTTTCAGGTGATGGAAAACCAGCTTCTCTTTCACTTAAAATGCATCCCGCCTTGGCATGGAAGGTTGAGTACAGTGACGCATTCTTGAATGGACTTGAGATTTTCAAGATCAGTGATTCACAAAAGAATCTCGCCGGACCAAACCCCGATCCTCTTCCTCCATCTACTCCCAATCATAATGATCAAACCATATATCATGCAAGAAAAACCAGAAAGCTAATTCTAATCGGGGTCATCGTCGGTGTTGCAGCTTCCATGGTCGTTCTGGTTTCCTGTGTAGCGTTCTTCCTCATCAACCGTGGCAAGAAGTCCAACAAATCTCACAAGTCCAGCTGCGGAACATCAAAGTGGGGTCCATTTTCATTCACCACAATAAAATCAGCAAGCACCACCACCAACGGCTCATCACTTCCTATGGAACTGTGCCGTCACTTTTCCATCGCCGAGATCAGAGCCGCCACAAACAACTTCGACGAGCTCTTCAACGTCGGAGTCGGAGGCTTCGGCAACGTCTACAAAGGTTACATTGACGGTGGCCAAACTCCGGTTGCGATCAAGCGGCTCAAACCGGGTTCACAGCAAGGGCTCCACGAGTTCAAAACCGAAATCGAAATGCTCTCGCAGCTTCGTCACCACCATCTAGTCTCTCTCATAGGTTACTGTTACGAAAGCAACGAGATGGTACTAGTCTACGATTTCATGGCCCGTGGGACCCTCCGTAACCATTTGTATAACACAGATAATCCAGCTCTTCCGTGGAAAAGACGACTCCAGATTTGTATAGGAGCAGCACGAGGGCTGCATTATCTCCATACAGGTGCGAAGCAAATGGTCATCCACCGTGACGTAAAGACCACGAATATCTTGATAGACGACAAGTGGGAGGCCAAGGTTTCGGACTTCGGGTTATCCAGAATCGGGCCCAATGGGCTCAAGGCCCACGTTAGCACGGTAGTTAAAGGAAGCATAGGTTATCTTGACCCGGAATACTACAAACGACAGCATTTAACGGAGAAATCCGACGTGTACTCTTTTGGGGTTGTGCTGTTTGAGGTACTGTGTAGTCGGCCGCCGATAATACGAATCGCTGATAAGAGACAGGTGTTGCTATCTGATTGGGCGAGGAATTGCTTTCACAAAGGAACCTTAATTGAGATAGTGGATCCAGCTTTGAAAGGGACGATTGCAACAGAGTGCTTGAAGAAGTTTGGCGAGATTGGAGTCAGCTGTTTGCTTGATGACGCGACGCAGAGGCCATCTATGAACGACGTCGTTTGGGGTCTGGAATTTGCTCTTCAACTGCAAGAGAGCGCTGAGAAGATGAGAGGAAGGGAAGAAGATGATGACGATGGTGAAGGAGGTAATAAGAAGAAGAATTGTGCAGAAGATAGTGATAGCATGTTTAGTAGTAATAACAGTGTTTGGGTGGTTTCGGACTTTAATAAGAGCAGTGGAGTGAGCGTGACGAGCACTACTGGAGATCATAGCAAGGATAGTTCTAGATTGCTGGATAATTCTGTTTTCTCAGAGATTTTAGACCCAAGGGCTCGATAG	2700	0.4578	MKTKLRLLHPNMSELSTSASLRTIFFLCFPLLFPFILASFYTPVDLLSINCGSSGHSSGNDRTWTGDVDSKFLHREGESIVATALTQSPSTQQVPYTTARLSRSQFSYSFPVSPGQKFLRLFFYPASYPGFDRFNAFFTVKSGGFTLLKDFNASVTADANSVDTIFREYCVSIGDGERLNLTFTPNSTDPHSYAFVNGIEIVSMPEDLYYTKHESLGFKLIGSAAMFSISDNVALQTEYRLNVGGKHISALEDTGMLRFWGVDGSFVVKTSLPTDYEGWRRRLIFSEVPNYTAPEQVYRTERDMGMNKTLNMISNLTWEFPVNSGFTYMLRLHFCELNPDINISYNRMFDIYIADQLAEDDANVLHWAKEKAIPVYRDYAVIVSGDGKPASLSLKMHPALAWKVEYSDAFLNGLEIFKISDSQKNLAGPNPDPLPPSTPNHNDQTIYHARKTRKLILIGVIVGVAASMVVLVSCVAFFLINRGKKSNKSHKSSCGTSKWGPFSFTTIKSASTTTNGSSLPMELCRHFSIAEIRAATNNFDELFNVGVGGFGNVYKGYIDGGQTPVAIKRLKPGSQQGLHEFKTEIEMLSQLRHHHLVSLIGYCYESNEMVLVYDFMARGTLRNHLYNTDNPALPWKRRLQICIGAARGLHYLHTGAKQMVIHRDVKTTNILIDDKWEAKVSDFGLSRIGPNGLKAHVSTVVKGSIGYLDPEYYKRQHLTEKSDVYSFGVVLFEVLCSRPPIIRIADKRQVLLSDWARNCFHKGTLIEIVDPALKGTIATECLKKFGEIGVSCLLDDATQRPSMNDVVWGLEFALQLQESAEKMRGREEDDDDGEGGNKKKNCAEDSDSMFSSNNSVWVVSDFNKSSGVSVTSTTGDHSKDSSRLLDNSVFSEILDPRAR	899

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Accr2g01023	899	PANTHER	OS03G0124300 PROTEIN-RELATED	25	490	IPR046957	GO:0004672
	Accr2g01023	899	CDD	STKc_IRAK	545	807	-	-
	Accr2g01023	899	ProSitePatterns	Protein kinases ATP-binding region signature.	545	568	IPR017441	GO:0005524
	Accr2g01023	899	FunFam	Receptor-like protein kinase FERONIA	616	832	-	-
	Accr2g01023	899	FunFam	FERONIA receptor-like kinase	46	205	-	-
	Accr2g01023	899	Pfam	Protein tyrosine and serine/threonine kinase	544	807	IPR001245	GO:0004672\|GO:0006468
	Accr2g01023	899	Gene3D	Phosphorylase Kinase; domain 1	524	615	-	-
	Accr2g01023	899	MobiDBLite	consensus disorder prediction	821	850	-	-
	Accr2g01023	899	MobiDBLite	consensus disorder prediction	821	845	-	-
	Accr2g01023	899	FunFam	FERONIA receptor-like kinase	233	420	-	-
	Accr2g01023	899	Gene3D	-	233	420	-	-
	Accr2g01023	899	Gene3D	-	46	205	-	-
	Accr2g01023	899	ProSiteProfiles	Protein kinase domain profile.	539	813	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Accr2g01023	899	Gene3D	Transferase(Phosphotransferase) domain 1	616	835	-	-
	Accr2g01023	899	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	660	672	IPR008271	GO:0004672\|GO:0006468
	Accr2g01023	899	SMART	serkin_6	539	813	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Accr2g01023	899	FunFam	Receptor-like protein kinase FERONIA	511	615	-	-
	Accr2g01023	899	Pfam	Malectin-like domain	49	419	IPR024788	-
	Accr2g01023	899	SUPERFAMILY	Protein kinase-like (PK-like)	515	812	IPR011009	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Accr2g01023	Accr-Chr2	33598261	33600960	Proximal

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Accr2g01023	35	899	Receptor kinase-like Gene Family	AT3G51550	49.261	0.0	793

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_CrRLK1L-1	Accr2g01023		Malectin_like	6.7e-38	CL0202

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Accr2g01023	-		-	gsj:114381619	992.645