Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr2g01010 ATGGTGACCGTCATGAAATTGAAAGGTTCAGAGAAAGAGTGGAGGAAAGGCCCTTGGACTCATGAAGAAGATAAGTTGCTTACTGAATATGTCAACTTTCATGGCGAGAGAAACTGGAGTTCTGTATCAAGATTTTCAGGGTTGAATAGGAGTGGAAAAAGCAGCAGGTTGCGATGGGTGAACTATTTGAAACCTGGACTCAAGAAAGGCCCACTTACACCTCAAGAACAAGGAATCATTATTGAACTTCATGCCTTGCTGGGTAACAAGTGGTCTACAATAGCTAGATACTTGCCTGGTAGAACAGATAATGAGATCAAGAACTATTGGAGAACTCACTTCAAGAAGAAGGACCACAAGTCATCTCACAATAAGAACCTTGAAAATCGAAGAGCAAAGATGCTAAGTTATAAACAGCAAACAGTGAATGAGCAACAACCTCAAGAATATGATATGAAAAGCATGTCGTCTCACGGAGATACCAAAAGGGAACCAAGCATTATGACCGAGACTACACCAGAAAACGAAGAGCATGCGATCATGGATTTAATTCTTCAGAACCCAACTTTGGAAGATCAGTTTTACATACCTTCGATGTACCAAGAGACGTACTTTTCATCTGTTTGTCAAGAAACTGAAGGAGATGATAGTTTGTGGGTTAGTTTATGGGATCAGCTTGATGCATAA 687 0.4032 MVTVMKLKGSEKEWRKGPWTHEEDKLLTEYVNFHGERNWSSVSRFSGLNRSGKSSRLRWVNYLKPGLKKGPLTPQEQGIIIELHALLGNKWSTIARYLPGRTDNEIKNYWRTHFKKKDHKSSHNKNLENRRAKMLSYKQQTVNEQQPQEYDMKSMSSHGDTKREPSIMTETTPENEEHAIMDLILQNPTLEDQFYIPSMYQETYFSSVCQETEGDDSLWVSLWDQLDA 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr2g01010 228 ProSiteProfiles Myb-like domain profile. 11 63 IPR001005 -
Accr2g01010 228 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 64 118 IPR017930 -
Accr2g01010 228 CDD SANT 73 114 IPR001005 -
Accr2g01010 228 ProSiteProfiles Myb-like domain profile. 64 114 IPR001005 -
Accr2g01010 228 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 11 63 IPR017930 -
Accr2g01010 228 PANTHER MYB TRANSCRIPTION FACTOR-RELATED-RELATED 11 186 IPR044676 GO:0003700|GO:0006355|GO:0043565
Accr2g01010 228 Pfam Myb-like DNA-binding domain 16 63 IPR001005 -
Accr2g01010 228 Pfam Myb-like DNA-binding domain 69 113 IPR001005 -
Accr2g01010 228 MobiDBLite consensus disorder prediction 142 166 - -
Accr2g01010 228 SMART sant 68 116 IPR001005 -
Accr2g01010 228 SMART sant 15 65 IPR001005 -
Accr2g01010 228 SUPERFAMILY Homeodomain-like 14 110 IPR009057 -
Accr2g01010 228 CDD SANT 18 63 IPR001005 -
Accr2g01010 228 Gene3D - 16 68 - -
Accr2g01010 228 FunFam Myb transcription factor 16 68 - -
Accr2g01010 228 Gene3D - 71 149 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr2g01010 Accr-Chr2 33056592 33058275 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr2g01010 15 224 MYB Transcription Factor Family AT3G30210 50.237 3.37e-61 191
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Accr2g01010 Myb_DNA-binding 2.2e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr2g01010 K09422 - gmx:100816944 253.062