Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr2g01001 ATGGCAGATCAACAGCCTCCTCCGCCAGCACCGCCAGCACCTAAAGGCTATAGATTAACTGCCTCTTCAATCTTCTACGCCAAAAGCACCGCCACAATTCCGCCATTCTTACATCTTTTCAAATACTGTACCACCACAAGCCCTCCTTCTTATATCCTCAAGAACGTTTGCCTCACCGCCTACCCCTCCCAAATCCTCGCCATTGTCGGCCCCAGCGGTGCCGGCAAGTCCACCCTCCTTGACATCCTCGCCGCCCGCACTTCCGCCACCTCTGGCACACTCCTCCTCAACTCCTCTCCCTTCAACCCTTCCTCCTTCCGCAAGCTTTCTTCTTACGTCCCACAACACGACGCCTGCCTCCCCCTCCTCACCGTCTCCGAGACCTTCGCCTTTGCCGCCCGCCTCCTCCAGCACAAGCCCTTCGACACGGCCTCCCTCCTCGCCGAGCTCGGTCTTACTCACTTAGCTCACATCAGGCTTGCCGATGGGCTTTCCGGCGGCGAACGAAGACGTGTCTCCATCGGCCTCAGCCTCCTCCATGATCCAGGCGTGTTACTCCTCGACGAGCCCACCTCCGGCCTCGACAGTACCGGAGCTTTTAATGTCATGCAGATTCTAAAATCAATCTGCGTTTCACGTCACCGAACCATTGTGCTATCTATTCACCAACCAAGCTTCAAGATTCTCTCTGTCATTGACAGAATCTTATTTCTCTCCAAAGGATCAGTGGTTCACCATGGAACTCTTGCTTCGCTTCAGAGTTTTCTTCACTCTAATGGCTTCTCTGTGCCTCCTCAGCTCAACGCATTGGAATATGCCATGGAAATATTAAACCAACTCGACGAGCTAGAACCCATGAACAATAACACAGCTCCAGATGAAGAAACTCGTGCAAATTCTTCGCCTAACAACTTAGCCACTACCACTTCAAGAAAAATGATCCGATATAGGAGCTCAAGAATTCAAGAAATCTGTGCTCTTTACAGCAGATTTTGGAAGATCATTTACAGAACAAAGCAGTTACTTTTGACCAACACATTAGAATCACTTCTCGTTGGCCTTGTTCTTGGAACTATTTACATCAACATTGGCTTTGACAAGGAAGGGATCGAAAAAAGGTTCGGTCTTTTTGCTTTTACTCTCACTTTCCTCCTTTCTTCCACCACTGAAACACTTCCGATCTTCATCGGAGAAAGACCGATCTTACTGAGAGAAACATCAAGTGGGGTTTATAGGTTATCCTCTTACATTATCGCCAACACACTCGTTTTCTTACCATACTTACTGGTTATTGCTGTTATCTACTCTATTCCAGTCTACTTCTTAGTGGGTTTGTGTGCTTCTTGGCTTTCTTTTGCTTACTTCGTTCTGGTCATTTGGCTCATAGTTCTAATGGCTAATTCATTTGTCCTTTTCTTGAGCTCTATTGCACCTAACTACATTGCTGGCACTTCACTTGTGACAATGCTTCTTGCTGCTTTCTTTCTGTTTTCTGGGTATTTCATCTCCAAGGAAAGCTTACCCAAGTATTGGCTCTTCATGTACTTCTTTTCTATGTACAAGTACGCTCTTGATGCTCTTCTCATAAACGAATACTCTTGTTTGGTCACGAGGTGTTTCATATGGTACGAGGAAAATGAAGGAGAGTGTATGGTTACTGGAGGAGATGTGATGAACAAGAGAGGACTTAGCGAGGCTCAGAGATGGACTAATGTGTATGCCTTGCTTGGTTTCTTTGTGTTGTATCGTGTGCTTTGTTTGTTTGTGTTGATCAGAAGAGTTTCCAGAACAAAAAGTTAA 1800 0.4656 MADQQPPPPAPPAPKGYRLTASSIFYAKSTATIPPFLHLFKYCTTTSPPSYILKNVCLTAYPSQILAIVGPSGAGKSTLLDILAARTSATSGTLLLNSSPFNPSSFRKLSSYVPQHDACLPLLTVSETFAFAARLLQHKPFDTASLLAELGLTHLAHIRLADGLSGGERRRVSIGLSLLHDPGVLLLDEPTSGLDSTGAFNVMQILKSICVSRHRTIVLSIHQPSFKILSVIDRILFLSKGSVVHHGTLASLQSFLHSNGFSVPPQLNALEYAMEILNQLDELEPMNNNTAPDEETRANSSPNNLATTTSRKMIRYRSSRIQEICALYSRFWKIIYRTKQLLLTNTLESLLVGLVLGTIYINIGFDKEGIEKRFGLFAFTLTFLLSSTTETLPIFIGERPILLRETSSGVYRLSSYIIANTLVFLPYLLVIAVIYSIPVYFLVGLCASWLSFAYFVLVIWLIVLMANSFVLFLSSIAPNYIAGTSLVTMLLAAFFLFSGYFISKESLPKYWLFMYFFSMYKYALDALLINEYSCLVTRCFIWYEENEGECMVTGGDVMNKRGLSEAQRWTNVYALLGFFVLYRVLCLFVLIRRVSRTKS 599
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr2g01001 599 Pfam ABC-2 type transporter 222 284 IPR043926 GO:0140359
Accr2g01001 599 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 47 584 - -
Accr2g01001 599 FunFam ATP-binding cassette transporter 42 258 - -
Accr2g01001 599 Pfam ABC transporter 53 192 IPR003439 GO:0005524
Accr2g01001 599 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 48 255 IPR027417 -
Accr2g01001 599 ProSitePatterns ABC transporters family signature. 164 178 IPR017871 GO:0005524|GO:0016887
Accr2g01001 599 Pfam ABC-2 type transporter 323 532 IPR013525 GO:0016020|GO:0140359
Accr2g01001 599 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 37 265 IPR003439 GO:0005524
Accr2g01001 599 SMART AAA_5 62 242 IPR003593 GO:0016887
Accr2g01001 599 MobiDBLite consensus disorder prediction 285 305 - -
Accr2g01001 599 Gene3D - 39 296 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr2g01001 Accr-Chr2 32526229 32528028 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr2g01001 46 259 Calmodulin-binding Proteins AT2G36910 27.500 1.63e-16 81.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr2g01001 K05681 - cave:132167224 871.692