Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr2g00997 ATGGGTGAAGAAGACTGGGATATCTCTGCCGTGGTGCGAGGTTGCAGATCCTCCGCCGCCGCCGCCGCGGCTACCAGCACCAATACTCCACCAGCGTCATCTTCTTCTTCTTCATCCAAGGGCGTTCCTTTACCATTAATCAAGCAAGAAAATGAGGTCTGCTCAATTCCCAGTTTGATTCAACCCACAACCAATGGGTTTCAAGAACTACAACGATTGCTCAGACCCTTTATCCCCACCACCACCACAACCACCACTATCTCTACTAGTGGTTGTGGCATCTATCCCAATTCCTCTTTCACTGATTTTGCAGTTCCAGGGTCCAGTAGTAATAATATTAATAATAACATAAATACTTCTGCATCATTTTCTTACGCGTCCAATACCAGGCCTCATTTTGTGCCACAAGCCTCACCCTCCACTAGTTCTCCTGGATTGCAAAGATTCCATGACCAACATGTACAGAAACTCCAAAAACAAAAGCAAATTCAAGATCAATTACAACAACTAGTTCATCAGAAACAGCAATTTCTAACACCGCCAGGTCAAATCAGCAGCGGCGGTAGTAATAATTCGGTTATGACTTTACCAAATACGCAAGCTGCTCAAGTAACAACCAGATCGAGAAAAAGAAAGAGTCAACAGAGAAGAATGGTTTGCCATGTAACAGCGGAAAACCTCACCGCAGATTCTTGGGCCTGGAGAAAATACGGTCAAAAGCCTATTAAAGGTTCTCCATATCCCAGGAACTATTATAGATGTAGCAGTTTAAAAGGTTGTGGGGCCCGGAAGCAAGTGGAACGAAGCAATACTGAAGCAGATATGTTCATCGTCACGTACACCGGAGAACATACGCATCCGCGACCTACCCATCGGAACTCGCTTGCCGGAAGTACTAGGAACAAACCGTCGTCTTTGACGACGACCCGTCAACCCGCCTCTCATGAATCTGGGTCACCAAGCACTAACGTGAACCGGCCATCGTCATCTTCACAGCGTTCCCCGACGACGCCTTTGACGGAGGTGGCGGCGAAAGACGAGTGCGCTGATGAACCCATGTTAAGCAATGAAGCCACGAGCCCTTTCCCTGAAGATGATTTAGACTTGGCCTCTCACGATGACATTTTGATACCAAACATGGCGGCCATGATGGATAAGTTCTTGCTGGGTGCTGATGAGCTTCACCTCGGAATTGGACTTAGTGGCGGTGGGGGTGATTGCACACGCAGCAATCCAGCGGATGGGTCGTATCCAAGTACTGACCCGGGTTGA 1272 0.4796 MGEEDWDISAVVRGCRSSAAAAAATSTNTPPASSSSSSSKGVPLPLIKQENEVCSIPSLIQPTTNGFQELQRLLRPFIPTTTTTTTISTSGCGIYPNSSFTDFAVPGSSSNNINNNINTSASFSYASNTRPHFVPQASPSTSSPGLQRFHDQHVQKLQKQKQIQDQLQQLVHQKQQFLTPPGQISSGGSNNSVMTLPNTQAAQVTTRSRKRKSQQRRMVCHVTAENLTADSWAWRKYGQKPIKGSPYPRNYYRCSSLKGCGARKQVERSNTEADMFIVTYTGEHTHPRPTHRNSLAGSTRNKPSSLTTTRQPASHESGSPSTNVNRPSSSSQRSPTTPLTEVAAKDECADEPMLSNEATSPFPEDDLDLASHDDILIPNMAAMMDKFLLGADELHLGIGLSGGGGDCTRSNPADGSYPSTDPG 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr2g00997 423 Pfam WRKY DNA -binding domain 230 287 IPR003657 GO:0003700|GO:0006355|GO:0043565
Accr2g00997 423 MobiDBLite consensus disorder prediction 179 208 - -
Accr2g00997 423 ProSiteProfiles WRKY domain profile. 223 289 IPR003657 GO:0003700|GO:0006355|GO:0043565
Accr2g00997 423 MobiDBLite consensus disorder prediction 179 218 - -
Accr2g00997 423 MobiDBLite consensus disorder prediction 20 42 - -
Accr2g00997 423 MobiDBLite consensus disorder prediction 403 423 - -
Accr2g00997 423 MobiDBLite consensus disorder prediction 291 339 - -
Accr2g00997 423 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 5 392 IPR044810 GO:0003700
Accr2g00997 423 SMART WRKY_cls 228 288 IPR003657 GO:0003700|GO:0006355|GO:0043565
Accr2g00997 423 SUPERFAMILY WRKY DNA-binding domain 222 289 IPR036576 GO:0003700|GO:0006355|GO:0043565
Accr2g00997 423 FunFam WRKY transcription factor 22 211 282 - -
Accr2g00997 423 Gene3D WRKY domain 213 290 IPR036576 GO:0003700|GO:0006355|GO:0043565
Accr2g00997 423 MobiDBLite consensus disorder prediction 280 366 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr2g00997 Accr-Chr2 31959465 31960985 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr2g00997 207 358 WRKY Transcription Factor Family AT5G52830 61.438 1.10e-55 186
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Accr2g00997 WRKY 2.5e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr2g00997 - - pcin:129285324 510.375