Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr2g00978 ATGGATCCCTTCATGGTGTCGTCAACCACCACTCTGCCAACGCCAGCCGTGGACGTTGGACAGGGGTTCGGGACTCCCCAGGTTGAGTCCCACCACTGTAGTGCTCTCTCTAGCAGTAACTCCAGAGTTACCAGCTATGATGACCTGGCTCGGTTCGACCCTTTTAACATCGACTTTATCGATAGCCCTCCACTGCTTCCTGATGCTACAGTCGACCCCACCGTTGCTTTTTCGCCGGAGGAATTGAGCTACCTGAACCCTGGACAAAGCATGCTAGAGGGATCCCTTGGGGGCCATATCCAGAGCTGGTCTATGGATTCCGATCTCATGGACTATATTGAAGACCGCGAAGGCTTCGCCGGAGCCAGCGAGGATCTGGGGGGGAACGATGCTCTGCCAGCGAACACAGCGGTGCATCCGGCGCAGGGTGCTTGCATGGATGGTTCAGCCAATACTGTGTCGACTGAGACTGAGCAGCCTATGGCGAATGAAGCTGTAAAGAAAGCCATGCCCAATGAGAAGCTCGCTGAACTAGCTGTGTTAGATCCCAAGCGAGCTAAGAGGATTATTGCTAATAGGCAATCTGCTGCTCGTTCAAAGGAGAGGAAGATTCGTCACAGAGTGGAGCTGGAGAAGAAGGTGGACATACTTCAAGCTGACTCAGCTGTGATCTCTGACAAGGTTGAGAAAATTCAGAAGGAAAATTCGGACTTGGAAGCTGAGAAGAAGGATATCGTACGTGATGTAGAGTCTATGGATGGAGAAGCAAAGGTTAGGGAAGAACTGAACCGAACTTTAAGGGATAAGCTGAGGGTACTTAAGAAGGAATATAAAGAAAAAGTTGCATATAAGCGCCTTTATCATGGAAGGATGGTCTCTTATCTTTCTTCTGACTTAGCAGTGTATCAGGCGAAGCTTCTTCGATTTTGGCAGGGTCAGCAGCAACTTGGCATGCCTCCATCGCGCTCAGATCAGCCTGACGACTCAGAGTCAGATTCGGATGAATCGAGTTCAGACTCAGAAAATTAG 1029 0.5015 MDPFMVSSTTTLPTPAVDVGQGFGTPQVESHHCSALSSSNSRVTSYDDLARFDPFNIDFIDSPPLLPDATVDPTVAFSPEELSYLNPGQSMLEGSLGGHIQSWSMDSDLMDYIEDREGFAGASEDLGGNDALPANTAVHPAQGACMDGSANTVSTETEQPMANEAVKKAMPNEKLAELAVLDPKRAKRIIANRQSAARSKERKIRHRVELEKKVDILQADSAVISDKVEKIQKENSDLEAEKKDIVRDVESMDGEAKVREELNRTLRDKLRVLKKEYKEKVAYKRLYHGRMVSYLSSDLAVYQAKLLRFWQGQQQLGMPPSRSDQPDDSESDSDESSSDSEN 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr2g00978 342 Coils Coil 221 255 - -
Accr2g00978 342 Gene3D - 183 248 - -
Accr2g00978 342 Pfam bZIP transcription factor 184 242 IPR004827 GO:0003700|GO:0006355
Accr2g00978 342 CDD bZIP_plant_RF2 185 235 IPR044759 GO:0003700|GO:0006355
Accr2g00978 342 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 182 245 IPR004827 GO:0003700|GO:0006355
Accr2g00978 342 SMART brlzneu 180 244 IPR004827 GO:0003700|GO:0006355
Accr2g00978 342 MobiDBLite consensus disorder prediction 328 342 - -
Accr2g00978 342 MobiDBLite consensus disorder prediction 315 342 - -
Accr2g00978 342 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 47 333 - -
Accr2g00978 342 SUPERFAMILY Leucine zipper domain 184 238 IPR046347 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr2g00978 Accr-Chr2 27869037 27871381 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr2g00978 30 315 bZIP Transcription Factor Family AT1G43700 31.875 1.50e-35 130
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Accr2g00978 bZIP_1 2.3e-07 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr2g00978 K20557 - csv:101207973 160.999