Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr2g00971 ATGCTGGGGGATTCATCGTCGGCTGTACTGGGTGGCGTTGGAGGAGGAGGAGGCGGGGGTAACTCTTCTGATGCAGTAGCGCCGACAGCCGTGGCTGCAGGGACGTCTTCTCATGACGGTGGCGAGTGGACAGTGGCGGCTGCTGCAGCGGCTGGATCGAACTCTGGGGAGGAAGATGTGAGGGGAAGAGGGGAAGAAGGTGACCGGAGCTTCGGCGGAAACCGGTGGCCACGGCAAGAGACTTTGGCGCTCTTGAAAATGCGCTCCGACATGGACGTAGCGTTTCGAGATGCTAGCGTTAAAGGTCCTCTCTGGGAAGAAGTTTCCAGGAAAATGGCAGAGCTTGGGTATCACAGAAGCGCCAAGAAATGCAAAGAGAAATTCGAGAACCTGTACAAGTACCACAAGAGAACAAAAGATGGACGAACTGGGAAATCTGAAGGCAAAACGTATCGTTTCTTTGATCAATTGGAAGCTCTTGATAATCAAAACCATCCTCCTCCTCCTACAATTCAATCCTCAAAACAGCCACCGCAAGCATCACCGTCAAAGCCCCCGTCGTCTCAGTTTATGGCAATACCTGCAACACCAGTTTCAGTGGTGGTGACGACGACGAATCCTCCTCCTCCTCCTCATCTCTCTACTGTTCCATCAACGATCACACCTCAACCCAACAACGCTCTAACTCCACCTATGGACCTCACTTCTTCCGCAATTAATAACAATCCTCCACCTTCCTACACTATTTTCCCACCACCACTACCGTCAACATCAGTCACAAATCCTATTCAATCTTCTTTCGCGGCTGACCTCTTGTCTAATTCACCATCTTCCTCGACTTCCTCAGACGAGTCGATAGAGCGGCGGCAGCGGCGGAAGCGGAAGTGGAAGGATTTCTTTGGGAGGCTGACGAAGGAGGTGATAGAGAAGCAGGAGCAAATGCAGAAGAGGTTATTGGAGGCCATTGAGAAGCGAGAACATGAAAGGATGGTTCGTGAAGAAGCTTGGAGAATGCAAGAAATGGCGAGGATTAATCGAGAGCGTGAAATATTGGCACAGGAAAGATCTTTAGCCGCTGCCAAAGATGCTGCTGTAATGGCATTATTGCAGAAGATAACCGAACAGCAAAATCTCGGCCTCCCATTGAATAATATCTACATTTCTCCTCCACCACCACCGCCAACGATGACTCAACCAACAACACAACCAGCATCAGCTCCGGTGCCGGCTCCGGCTCTTACTCCTGCTCAACAACAGCAGAGTTCAGTGACAAACATGGAGATTGTAGCAACTGATAATAATAACAATAATGGGGAGAATTTGATGACACCGAGCTCGTCTAGGTGGCCAAAAGTGGAGGTTCAGGCATTGATAAAACTAAGAACGATCATGGACGAGAAGTACCAAGAGAATGGGCCAAAAGGGCCATTGTGGGAGGAGATCTCGGCGGAGATGAGGAGGCTCGGGTATAACAGAAACGCCAAGAGGTGTAAGGAGAAGTGGGAGAACATAAACAAGTACTTCAAGAAGGTGAAGGAAAGCAACAAGAAGAGGCCTGAAGATTCCAAGACCTGTCCGTATTTCCACCAGCTAGATGCTCTATACAGGGAGAAGAACAAGCATGAGATGATCAACACTCCTCCTCCGACTTCGGCCACGGCCACCGCGAATCATAATCTGAATCTGGCGGATAATAATAGCACAATGCCGACATCAGTGCCGCCGCTGATGGTTCAGCCAGAGCAGCAATGGCCTCCGCGGCAAGAAAACAACAACAAAAATGCAGAGTTGGAGGAGGAGGAAGAAGACGACATGGACGAAGAGAAGGATATTGAAGACGAAGATGATGAAGAAGAAGACGAAGAAGCGGAAGGAGGGAGCAACTATGAGATAGTAGCAAGCAAGCCAGCTTCAGTGAGTGCAGCTGAGTGA 1932 0.499 MLGDSSSAVLGGVGGGGGGGNSSDAVAPTAVAAGTSSHDGGEWTVAAAAAAGSNSGEEDVRGRGEEGDRSFGGNRWPRQETLALLKMRSDMDVAFRDASVKGPLWEEVSRKMAELGYHRSAKKCKEKFENLYKYHKRTKDGRTGKSEGKTYRFFDQLEALDNQNHPPPPTIQSSKQPPQASPSKPPSSQFMAIPATPVSVVVTTTNPPPPPHLSTVPSTITPQPNNALTPPMDLTSSAINNNPPPSYTIFPPPLPSTSVTNPIQSSFAADLLSNSPSSSTSSDESIERRQRRKRKWKDFFGRLTKEVIEKQEQMQKRLLEAIEKREHERMVREEAWRMQEMARINREREILAQERSLAAAKDAAVMALLQKITEQQNLGLPLNNIYISPPPPPPTMTQPTTQPASAPVPAPALTPAQQQQSSVTNMEIVATDNNNNNGENLMTPSSSRWPKVEVQALIKLRTIMDEKYQENGPKGPLWEEISAEMRRLGYNRNAKRCKEKWENINKYFKKVKESNKKRPEDSKTCPYFHQLDALYREKNKHEMINTPPPTSATATANHNLNLADNNSTMPTSVPPLMVQPEQQWPPRQENNNKNAELEEEEEDDMDEEKDIEDEDDEEEDEEAEGGSNYEIVASKPASVSAAE 643
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr2g00971 643 Gene3D - 449 510 - -
Accr2g00971 643 Gene3D - 76 137 - -
Accr2g00971 643 MobiDBLite consensus disorder prediction 218 244 - -
Accr2g00971 643 CDD GT1 447 512 - -
Accr2g00971 643 Pfam Myb/SANT-like DNA-binding domain 74 160 IPR044822 -
Accr2g00971 643 Pfam Myb/SANT-like DNA-binding domain 447 534 IPR044822 -
Accr2g00971 643 MobiDBLite consensus disorder prediction 185 202 - -
Accr2g00971 643 MobiDBLite consensus disorder prediction 561 643 - -
Accr2g00971 643 Coils Coil 587 617 - -
Accr2g00971 643 FunFam Trihelix transcription factor GT-2 76 137 - -
Accr2g00971 643 MobiDBLite consensus disorder prediction 58 73 - -
Accr2g00971 643 MobiDBLite consensus disorder prediction 203 217 - -
Accr2g00971 643 ProSiteProfiles Myb-like domain profile. 74 132 IPR001005 -
Accr2g00971 643 MobiDBLite consensus disorder prediction 269 292 - -
Accr2g00971 643 MobiDBLite consensus disorder prediction 170 184 - -
Accr2g00971 643 MobiDBLite consensus disorder prediction 595 626 - -
Accr2g00971 643 MobiDBLite consensus disorder prediction 561 591 - -
Accr2g00971 643 MobiDBLite consensus disorder prediction 160 247 - -
Accr2g00971 643 MobiDBLite consensus disorder prediction 390 410 - -
Accr2g00971 643 MobiDBLite consensus disorder prediction 269 283 - -
Accr2g00971 643 PANTHER FI21293P1 50 607 - -
Accr2g00971 643 Coils Coil 308 328 - -
Accr2g00971 643 CDD GT1 74 139 - -
Accr2g00971 643 MobiDBLite consensus disorder prediction 390 412 - -
Accr2g00971 643 MobiDBLite consensus disorder prediction 1 75 - -
Accr2g00971 643 FunFam Trihelix transcription factor GT-2 449 510 - -
Accr2g00971 643 ProSiteProfiles Myb-like domain profile. 447 505 IPR001005 -
Accr2g00971 643 SMART sant 445 507 IPR001005 -
Accr2g00971 643 SMART sant 72 134 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr2g00971 Accr-Chr2 27285826 27288642 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr2g00971 65 584 Trihelix Transcription Factor Family AT1G76880 54.580 4.21e-164 481
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Accr2g00971 Myb_DNA-bind_4 1.1e-21 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr2g00971 - - pcin:129284603 802.742