Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr2g00970 ATGCAGCTCGGAGAGCCGACCACTGTCGTATTGGGGATGGTCCCTAAGACCGCGGCAGCCGAAGCACCGCCTCCTCCTCCTCCTCCACCACCTGAAGCGGCGGAGGAGCCAGACGGAGGCGGCGAGATCATAATTGGGATAGATAATAATAAAGCAGCAGCCGCAGAAGCAACAACTTCATCTGGTGAAGGTGACAATAAGATAAACAGTGGAGGGAACCGGTGGCCCCGCCAAGAGACTTTGGCTCTGTTAAAGATAAGGTCTGATATGGATTCTGTGTTTCGAGATTCAAGTCTTAAAGGTCCACTCTGGGAAGAAGTTTCAAGGAAGCTGGGAGAGCTTGGTTATCAGAGAAGCGCAAAGAAGTGCAAGGAGAAATTTGAGAACGTGTATAAGTACCACAAGAGAACCAAAGATAGCAGAAATGCAAAACCAGAAGGAAAGACCAAAACCTATAGGTTTTTTGATGAATTAGAAGCTTTTGAATCTCGATTCACTCCTTCACATCATTCCCAAGTTCAATCTCAATCCCAGTCTCAATCTCATCATCCTCCAAAATCATTATCTCAGCCTTCTAATTTTGCTCCAAATACACTTACGTCATTGCCATTTCTCTCAACAAGGCCTAGTGATTATTCATCAACTACTTTCTCTTACGTCACCGGTGTGACGACTACTACTGCTATTAATACGAATGTTCCATCCTTGAATAATCATCCGGGGCTGGTGAATGCGGCGAACCTTTCAACCTCGACCTCGTCGTCCACGGACTCCGACGAGGACCTGGAGGAGAGGTACAGGAAGAAGAGGAAGTGGAAGGACTACTTCAGGAGGCTCACAAGGCGAGTGCTGGCTAGACAGGAGGAGATGCAGAGGAGGTTTTTGGACGCCGTTGACAAGCAAGATCGCGAGCGTGTGGCTCAGCAGGAAGCTTGGAGGATGCAAGAGATGGCTCGGATCAACCGCGAGCACGAAATCCTCATTCAAGAAAGATCCACCGCCGCCTCCAAGGATGCCGCCATTATTGCATTCTTACAGAAGTTGTCCGGCGGATCACGGCAGCCTCCTCCTCCTACACCGAAGAAGCCACCAGTGTCGGTGGTGTCACAGTTTCAACCGCAGCCACCACCACAACAACAACAAAACCAGCAGCAGCCGCAGTTGGTAGTGATGATGCCGAGTAACAACATTAGCTACGAAAAGTTTGAAATCCAGAAAATGAATAACAACAATCACAACATCGATGGCAGTAGTGGTGGCGGCGGCAGCGGCACTTCTTCACGGTGGCCAACCGCGGAGGTACATGCGCTGATAAGGCTGAGGACAAGCCTGGAGGCGAAGTATCAGGAAAACGGTCCTAAGGCTCCACTGTGGGAGGAAATATCAAGTGAGATGCAGAAATTGGGGTACAATAGGATTGCCAAGAGGTGCAAGGAGAAGTGGGAGAACATCAACAAGTACTTCAAGAAGATCAAAGAAAGCAACAAACAAAAGCGTGAGGATAGCAAGACTTGTCCTTACTACAAAGAGCTCGATGCTTTGTACAGAGAAAAGACCAAAAACAGTAACAAGAACCTCTTCGGTGATTCGTTTGGTCACAATGTGGAGCCATTAATGGTCCAGCCAGAGCAGCAATGGAGGCCTCCAACTCAAGAAGAAGAAGCCGCAAGTCGTCAGTATCAAGAATGCGAAGAAGACGATGACCATGACTATGAGGAAGACGTAGGTGGGGTTGAAGAAGAAGACGGAGGAAGTATCGACTTAGAAGATGAAGAAGAAGGTGGTGGCCGTGGCGGCGGTGATGATGGTCACGGTGGTCATGAGAATAATAACACGAAAAATAAACTTTCTTCTGTGGACACCGTTCAATGA 1872 0.485 MQLGEPTTVVLGMVPKTAAAEAPPPPPPPPPEAAEEPDGGGEIIIGIDNNKAAAAEATTSSGEGDNKINSGGNRWPRQETLALLKIRSDMDSVFRDSSLKGPLWEEVSRKLGELGYQRSAKKCKEKFENVYKYHKRTKDSRNAKPEGKTKTYRFFDELEAFESRFTPSHHSQVQSQSQSQSHHPPKSLSQPSNFAPNTLTSLPFLSTRPSDYSSTTFSYVTGVTTTTAINTNVPSLNNHPGLVNAANLSTSTSSSTDSDEDLEERYRKKRKWKDYFRRLTRRVLARQEEMQRRFLDAVDKQDRERVAQQEAWRMQEMARINREHEILIQERSTAASKDAAIIAFLQKLSGGSRQPPPPTPKKPPVSVVSQFQPQPPPQQQQNQQQPQLVVMMPSNNISYEKFEIQKMNNNNHNIDGSSGGGGSGTSSRWPTAEVHALIRLRTSLEAKYQENGPKAPLWEEISSEMQKLGYNRIAKRCKEKWENINKYFKKIKESNKQKREDSKTCPYYKELDALYREKTKNSNKNLFGDSFGHNVEPLMVQPEQQWRPPTQEEEAASRQYQECEEDDDHDYEEDVGGVEEEDGGSIDLEDEEEGGGRGGGDDGHGGHENNNTKNKLSSVDTVQ 623
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr2g00970 623 MobiDBLite consensus disorder prediction 349 386 - -
Accr2g00970 623 MobiDBLite consensus disorder prediction 409 429 - -
Accr2g00970 623 FunFam Trihelix transcription factor GT-2 75 136 - -
Accr2g00970 623 Gene3D - 429 490 - -
Accr2g00970 623 Gene3D - 75 136 - -
Accr2g00970 623 SMART sant 425 487 IPR001005 -
Accr2g00970 623 SMART sant 71 133 IPR001005 -
Accr2g00970 623 MobiDBLite consensus disorder prediction 53 76 - -
Accr2g00970 623 MobiDBLite consensus disorder prediction 165 201 - -
Accr2g00970 623 PANTHER FI21293P1 31 559 - -
Accr2g00970 623 ProSiteProfiles Myb-like domain profile. 67 131 IPR001005 -
Accr2g00970 623 MobiDBLite consensus disorder prediction 234 256 - -
Accr2g00970 623 CDD GT1 73 138 - -
Accr2g00970 623 MobiDBLite consensus disorder prediction 234 261 - -
Accr2g00970 623 MobiDBLite consensus disorder prediction 543 623 - -
Accr2g00970 623 FunFam Trihelix transcription factor GT-2 429 490 - -
Accr2g00970 623 MobiDBLite consensus disorder prediction 19 35 - -
Accr2g00970 623 MobiDBLite consensus disorder prediction 590 609 - -
Accr2g00970 623 MobiDBLite consensus disorder prediction 365 386 - -
Accr2g00970 623 Pfam Myb/SANT-like DNA-binding domain 427 514 IPR044822 -
Accr2g00970 623 Pfam Myb/SANT-like DNA-binding domain 73 160 IPR044822 -
Accr2g00970 623 MobiDBLite consensus disorder prediction 1 77 - -
Accr2g00970 623 MobiDBLite consensus disorder prediction 559 589 - -
Accr2g00970 623 CDD GT1 428 492 - -
Accr2g00970 623 ProSiteProfiles Myb-like domain profile. 427 485 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr2g00970 Accr-Chr2 27136305 27138775 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr2g00970 61 545 Trihelix Transcription Factor Family AT1G76890 49.123 4.58e-132 397
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Accr2g00970 Myb_DNA-bind_4 3.8e-21 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr2g00970 - - pcin:129303652 577.785