Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr2g00900 ATGAAGCATAAGCTAGAAGACATAACCAGCAGTTCTCCATCTTCATCCTCTCCGTCGACTTCCTCCGACTCCGACCACTCTTCCAAGAGGCGGCACCGTCATCGAAAGGAGCGGCGCAGAAGAAGCGATGTCAAGTCCAAGAGGGACAGGGAACGGAGAGGGGAAAAGGAAGAGAAAAGAAGAAGGAAGAGGAAGGAGAGTAGCAGACACAGAGAGAGAAAAGAAAGGAAGATGAGAAGAGAAGGGAAAAAGAAGAGGAGGAACTTCGATTCTGATGAAGTTAGTGAAGACGGGTTTGATTCTTCCCGTAGTAGGTCCGATGACGAAGAGAGATTGAGAGTCGAACCTGAAACTGTGGTGCGCGAAATGATGAGGGAATTTCCTAATGTTGGCAACGATTTGAAACAGCTTTTGCAAATGATTGATGATGGGCAAGCTGTTGACATCAAGGGAATATCTGAAAGATTGCTTATGAATCATTTGAAGAAGCTGTTTCTTTCATTAGATCTTGAGGAAAATGGAGATAGAGTGTTCTTACTTCCCTCTAAAGTTCGTCCCACTTTGGAAGTTGTTGGCCTTCTAATTCAGTCATATATAAGTTCCCGAAAGGAGCAAATAGATAGTCCTGTAGCAATGACTGAAACTCATTCAGTTCCAACAGATATGGGGAGTGAAAAGATGGTTGATGACCCAGAAGCTCCTTCTGCTCATCCACAAAGAAGAATGATAGGCCCTGCAATGCCATCAGCTGAGTTACTTGCTGCTGCAGCCAAATTAACAGAGGCTCAAGTTGAGCTCAGCGAAGCAGAATTGGCAGACGATGACAAATTATTCATAGGACCTCCACCCCCTGCTATGGTTACTGAATCAGAATCAGCTAATGAGGCAGAACGCTTTGAAGAGGTCACAAGAATCATGGAAGCTGAGGCTGACAGCCCATATGATATTCTTGGAGTCAACCATAATATGTCTACTGATAACATAAAGAAAAGGTACTGGAAGATATCACTTTTGGTTCACCCAGACAAATGCTCTCATCCTCTCGCCCACCAAGCATTTATCAAGATAAATAAAGCATTTAAAGAGTTACAAGATCCAGAGAAGAGGAAAGCAATGGATGATAAAATCAAACTGAAGCAAGAGCAAGAAGATTTGAAGGCTGAGTTCAAAGCTATGCGTGAGGCTGCACTCTGGCGAAGATCACAAGGTATATCAATGGAAGGTGATGATGTGCTTCTGGCAGAGACTGAGGTTAAAGAGGAGCCAAAAAGAGATGAGTGGATGACTACACTGCCTCCTGAGAGGAAACCTGGTGGTATGCCGACGCAAACAACTAAGTTCAGCCGGAGCTCAAAGGGAGGGCGTGGTGATACCAGTGTGTGGACAGATACTCCATCAGACAGAGCCCAGAAAGCAAAGATGAATTATTTAGAAGCATACAATGAGGCTACTGCCCTTGCCTCAAATGATGAGTCGAAGAAAAGGGCTAATGAGGATGCTGAGTTGGTGGAGAAATACAATAAAGCGAAGAGGTCAAAATCATTGGTAAAGAAGCACCAAGAAGAGCTTGCTAGCAAATCTAAGAAGAAATCAAAGCAGAAACAAGAAGCAGAGAAAGAAGATTGGGTAGGTCAACATCCATGGAAGCCTTGGGACCGTGAAACGGATCTCACAGCTGGGAGGATGAAAGTGAGATTGGATCCAGAAAGCATGGGCGAGGGCTTATCTTCAAGGTTTTCTTCTGGAACCTTCCAGAGGAACTTCCTCTGA 1770 0.4446 MKHKLEDITSSSPSSSSPSTSSDSDHSSKRRHRHRKERRRRSDVKSKRDRERRGEKEEKRRRKRKESSRHRERKERKMRREGKKKRRNFDSDEVSEDGFDSSRSRSDDEERLRVEPETVVREMMREFPNVGNDLKQLLQMIDDGQAVDIKGISERLLMNHLKKLFLSLDLEENGDRVFLLPSKVRPTLEVVGLLIQSYISSRKEQIDSPVAMTETHSVPTDMGSEKMVDDPEAPSAHPQRRMIGPAMPSAELLAAAAKLTEAQVELSEAELADDDKLFIGPPPPAMVTESESANEAERFEEVTRIMEAEADSPYDILGVNHNMSTDNIKKRYWKISLLVHPDKCSHPLAHQAFIKINKAFKELQDPEKRKAMDDKIKLKQEQEDLKAEFKAMREAALWRRSQGISMEGDDVLLAETEVKEEPKRDEWMTTLPPERKPGGMPTQTTKFSRSSKGGRGDTSVWTDTPSDRAQKAKMNYLEAYNEATALASNDESKKRANEDAELVEKYNKAKRSKSLVKKHQEELASKSKKKSKQKQEAEKEDWVGQHPWKPWDRETDLTAGRMKVRLDPESMGEGLSSRFSSGTFQRNFL 589
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr2g00900 589 MobiDBLite consensus disorder prediction 574 589 - -
Accr2g00900 589 MobiDBLite consensus disorder prediction 28 46 - -
Accr2g00900 589 MobiDBLite consensus disorder prediction 47 62 - -
Accr2g00900 589 CDD DnaJ 313 365 IPR001623 -
Accr2g00900 589 PANTHER DNAJ HEAT SHOCK N-TERMINAL DOMAIN-CONTAINING PROTEIN 4 589 - -
Accr2g00900 589 MobiDBLite consensus disorder prediction 215 239 - -
Accr2g00900 589 SMART dnaj_3 311 368 IPR001623 -
Accr2g00900 589 PRINTS DnaJ domain signature 314 332 IPR001623 -
Accr2g00900 589 PRINTS DnaJ domain signature 332 347 IPR001623 -
Accr2g00900 589 PRINTS DnaJ domain signature 348 368 IPR001623 -
Accr2g00900 589 MobiDBLite consensus disorder prediction 488 568 - -
Accr2g00900 589 MobiDBLite consensus disorder prediction 419 469 - -
Accr2g00900 589 ProSiteProfiles dnaJ domain profile. 312 377 IPR001623 -
Accr2g00900 589 Pfam DnaJ domain 313 373 IPR001623 -
Accr2g00900 589 SUPERFAMILY Chaperone J-domain 289 370 IPR036869 -
Accr2g00900 589 Coils Coil 516 540 - -
Accr2g00900 589 MobiDBLite consensus disorder prediction 8 23 - -
Accr2g00900 589 Coils Coil 252 272 - -
Accr2g00900 589 Coils Coil 368 395 - -
Accr2g00900 589 MobiDBLite consensus disorder prediction 63 84 - -
Accr2g00900 589 MobiDBLite consensus disorder prediction 488 589 - -
Accr2g00900 589 Gene3D DnaJ domain 296 396 IPR036869 -
Accr2g00900 589 MobiDBLite consensus disorder prediction 85 114 - -
Accr2g00900 589 MobiDBLite consensus disorder prediction 1 114 - -
Accr2g00900 589 Pfam Protein of unknown function (DUF3752) 432 580 IPR022226 -
Accr2g00900 589 MobiDBLite consensus disorder prediction 441 469 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr2g00900 Accr-Chr2 24323265 24339507 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr2g00900 324 386 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 40.000 4.87e-06 47.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr2g00900 - - pcin:129292962 884.019