Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr2g00898 ATGAGTGATAGAAAAATGAAGCATAAGCTAGAAGACATAACCAGCAGTTCTCCATCTTCATCCTCTCCGTCGACTTCCTCCGACTCCGACCACTCTTCCAAGAGGCGGCACCGTCATCGAAAGGAGCGGCGCAGAAGAAGCGATGTCAAGTCCAAGAGGGACAGGGAACGGAGAGGGGAAAAGGAAGAGAAAAGAAGAAGGAAGAGGAAGGAGAGTAGCAGACACAGAGAGAGAAAAGAAAGGAAGATGAGAAGAGAAGGGAAAAAGAAGAGGAGGAACTTCGATTCTGATGAAGTTAGTGAAGACGGGTTTGATTCTTCCCGTAGTAGGTCCGATGACGAAGAGAGATTGAGAGTCGAACCTGAAACTGTGGTGCGCGAAATGATGAGGGAATTTCCTAATGTTGGCAACGATTTGAAACAGCTTTTGCAAATGATTGATGATGGGCAAGCTGTTGACATCAAGGGAATATCTGAAAGATTGCTTATGAATCATTTGAAGAAGCTGTTTCTTTCATTAGATCTTGAGGAAAATGGAGATAGAGTGTTCTTACTTCCCTCTAAAGTTCGTCCCACTTTGGAAGTTGTTGGCCTTCTAATTCAGTCATATATAAGTTCCCGAAAGGAGCAAATAGATAGTCCTGTAGCAATGACTGAAACTCATTCAGTTCCAACAGATATGGGGAGTGAAAAGATGGTTGATGACCCAGAAGCTCCTTCTGCTCATCCACAAAGAAGAATGATAGGCCCTGCAATGCCATCAGCTGAGTTACTTGCTGCTGCAGCCAAATTAACAGAGGCTCAAGTTGAGCTCAGCGAAGCAGAATTGGCAGACGATGACAAATTATTCATAGGACCTCCACCCCCTGCTATGGTTACTGAATCAGAATCAGCTAATGAGGCAGAACGCTTTGAAGAGGTCACAAGAATCATGGAAGCTGAGGCTGACAGCCCATATGATATTCTTGGAGTCAACCATAATATGTCTACTGATAACATAAAGAAAAGGTACTGGAAGATATCACTTTTGGTTCACCCAGACAAATGCTCTCATCCTCTCGCCCACCAAGCATTTATCAAGATAAATAAAGCATTTAAAGAGTTACAAGATCCAGAGAAGAGGAAAGCAATGGATGATAAAATCAAACTGAAGCAAGAGCAAGAAGATTTGAAGGCTGAGTTCAAAGCTATGCGTGAGGCTGCACTCTGGCGAAGATCACAAGGTATATCAATGGAAGGTGATGATGTGCTTCTGGCAGAGACTGAGGTTAAAGAGGAGCCAAAAAGAGATGAGTGGATGACTACACTGCCTCCTGAGAGGAAACCTGGTGGTATGCCGACGCAAACAACTAAGTTCAGCCGGAGCTCAAAGGGAGGGCGTGGTGATACCAGTGTGTGGACAGATACTCCATCAGACAGAGCCCAGAAAGCAAAGATGAATTATTTAGAAGCATACAATGAGGCTACTGCCCTTGCCTCAAATGATGAGTCGAAGAAAAGGGCTAATGAGGATGCTGAGTTGGTGGAGAAATACAATAAAGCGAAGAGGTCAAAATCATTGGTAAAGAAGCACCAAGAAGAGCTTGCTAGCAAATCTAAGAAGAAATCAAAGCAGAAACAAGAAGCAGAGAAAGAAGATTGGGTAGGTCAACATCCATGGAAGCCTTGGGACCGTGAAACGGATCTCACAGCTGGGAGGATGAAAGTGAGATTGGATCCAGAAAGCATGGGCGAGGGCTTATCTTCAAGGTTTTCTTCTGGAACCTTCCAGAGGAACTTCCTCTGA 1785 0.4431 MSDRKMKHKLEDITSSSPSSSSPSTSSDSDHSSKRRHRHRKERRRRSDVKSKRDRERRGEKEEKRRRKRKESSRHRERKERKMRREGKKKRRNFDSDEVSEDGFDSSRSRSDDEERLRVEPETVVREMMREFPNVGNDLKQLLQMIDDGQAVDIKGISERLLMNHLKKLFLSLDLEENGDRVFLLPSKVRPTLEVVGLLIQSYISSRKEQIDSPVAMTETHSVPTDMGSEKMVDDPEAPSAHPQRRMIGPAMPSAELLAAAAKLTEAQVELSEAELADDDKLFIGPPPPAMVTESESANEAERFEEVTRIMEAEADSPYDILGVNHNMSTDNIKKRYWKISLLVHPDKCSHPLAHQAFIKINKAFKELQDPEKRKAMDDKIKLKQEQEDLKAEFKAMREAALWRRSQGISMEGDDVLLAETEVKEEPKRDEWMTTLPPERKPGGMPTQTTKFSRSSKGGRGDTSVWTDTPSDRAQKAKMNYLEAYNEATALASNDESKKRANEDAELVEKYNKAKRSKSLVKKHQEELASKSKKKSKQKQEAEKEDWVGQHPWKPWDRETDLTAGRMKVRLDPESMGEGLSSRFSSGTFQRNFL 594
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr2g00898 594 MobiDBLite consensus disorder prediction 90 119 - -
Accr2g00898 594 SUPERFAMILY Chaperone J-domain 294 375 IPR036869 -
Accr2g00898 594 PANTHER DNAJ HEAT SHOCK N-TERMINAL DOMAIN-CONTAINING PROTEIN 3 594 - -
Accr2g00898 594 MobiDBLite consensus disorder prediction 446 474 - -
Accr2g00898 594 Coils Coil 521 545 - -
Accr2g00898 594 Coils Coil 373 400 - -
Accr2g00898 594 PRINTS DnaJ domain signature 353 373 IPR001623 -
Accr2g00898 594 PRINTS DnaJ domain signature 337 352 IPR001623 -
Accr2g00898 594 PRINTS DnaJ domain signature 319 337 IPR001623 -
Accr2g00898 594 MobiDBLite consensus disorder prediction 33 51 - -
Accr2g00898 594 MobiDBLite consensus disorder prediction 52 67 - -
Accr2g00898 594 Pfam DnaJ domain 318 378 IPR001623 -
Accr2g00898 594 Gene3D DnaJ domain 301 401 IPR036869 -
Accr2g00898 594 MobiDBLite consensus disorder prediction 493 594 - -
Accr2g00898 594 MobiDBLite consensus disorder prediction 424 474 - -
Accr2g00898 594 SMART dnaj_3 316 373 IPR001623 -
Accr2g00898 594 Pfam Protein of unknown function (DUF3752) 437 585 IPR022226 -
Accr2g00898 594 ProSiteProfiles dnaJ domain profile. 317 382 IPR001623 -
Accr2g00898 594 MobiDBLite consensus disorder prediction 13 28 - -
Accr2g00898 594 Coils Coil 257 277 - -
Accr2g00898 594 MobiDBLite consensus disorder prediction 68 89 - -
Accr2g00898 594 MobiDBLite consensus disorder prediction 579 594 - -
Accr2g00898 594 MobiDBLite consensus disorder prediction 1 119 - -
Accr2g00898 594 CDD DnaJ 318 370 IPR001623 -
Accr2g00898 594 MobiDBLite consensus disorder prediction 220 244 - -
Accr2g00898 594 MobiDBLite consensus disorder prediction 493 573 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr2g00898 Accr-Chr2 24323250 24339507 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr2g00898 329 391 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 40.000 5.29e-06 47.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr2g00898 - - pcin:129292962 884.019