Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr2g00887 ATGGATCACAACGTCCAAGCCGTCCTCGCCGCCGTCATTAGCTTCTTTGTAGTCACCCTGATCTTCGCCGCTATCATTTTCCTCTGTAAAAGCAACACCAAAACCCATCCTCGTCAGCGTCAATACCGTGCCCCGACTCAAAATCGGACCCAGCCGGAGCTATCCTCCGTCGTCGTCGACGGTAGCTGGTCGTTCGATCCCTACGTTCAGTTCACCTGGGACGAGATCACTAAATCTACCAATAATTTCTCCCCCGACCTCATCATCGGCGACGGCAGCTTCGGCCTCGTCTACAAAGCGCGTCTCTCCAACGGCCTCGTCGTCGCCATCAAGAAGCTCTCGCCGGACGCGTTCCAAGGATTTCGTGAATTCCGTGCTGAGATGGAAACCCTAGCGAAGCTCCGGCATCCAAATATCGTCAAGATCCTCGGTTACTGGTCGGCGGGACAGGAGAGAATGTTGGTCTACGAGTTCATGGAGAGAGGCAATCTCGATCAATGGTTTCACGATCCGACGATCTCATCGTCGTTTGGACACGGCGACGTTTCAATGCCACGGGCCCCACTCTCGTGGGGGGTGAGGTTGAAGATAATCAGAGGCATTGCAAATGGGCTTTTTTACTTACATGGGCTGGAGAAGCCCATCATTCACAGAGATATTAAGGCTAGTAATGTGTTGCTGGATTCTGAATTTGAGGCCCATATTGCTGATTTTGGGCTCGCTAGGAGGATTGACACTTCGCACTCTCATGTGTCGACTCAGTTCGCCGGAACTATGGGCTATATGCCGCCGGAGTACAGAGATGGGGTGAATGTGGCTAACGTAAAGGTGGATGTCTACAGTTTTGGGGTTTTGATGCTTGAAACCGCGACTGGCCGGCGGCCGAATCTGTCGGTGAAGTTCGAGAATAAGGATATTGGGCTCGTGCAATGGGCCAGGAAAATGGAGGCCCAGAACGCCCAAATGGAAATGGTTGATCCCAATATTTCAAGAGAAGGAATAAGTGAAGATGGTGTGAAGGAGTACTTTAGGATTGCTTGTAAGTGCACAAGTGAATTACAGAAAGACAGACCTGTAATGCAAGAGGTTGTGGAATGGTTCGAGAAGATGGCCATGTAA 1119 0.5103 MDHNVQAVLAAVISFFVVTLIFAAIIFLCKSNTKTHPRQRQYRAPTQNRTQPELSSVVVDGSWSFDPYVQFTWDEITKSTNNFSPDLIIGDGSFGLVYKARLSNGLVVAIKKLSPDAFQGFREFRAEMETLAKLRHPNIVKILGYWSAGQERMLVYEFMERGNLDQWFHDPTISSSFGHGDVSMPRAPLSWGVRLKIIRGIANGLFYLHGLEKPIIHRDIKASNVLLDSEFEAHIADFGLARRIDTSHSHVSTQFAGTMGYMPPEYRDGVNVANVKVDVYSFGVLMLETATGRRPNLSVKFENKDIGLVQWARKMEAQNAQMEMVDPNISREGISEDGVKEYFRIACKCTSELQKDRPVMQEVVEWFEKMAM 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr2g00887 372 Pfam Protein kinase domain 88 365 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr2g00887 372 FunFam Phytosulfokine receptor 2 45 158 - -
Accr2g00887 372 ProSitePatterns Protein kinases ATP-binding region signature. 89 112 IPR017441 GO:0005524
Accr2g00887 372 SUPERFAMILY Protein kinase-like (PK-like) 63 367 IPR011009 -
Accr2g00887 372 SMART serkin_6 83 367 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr2g00887 372 ProSitePatterns Serine/Threonine protein kinases active-site signature. 215 227 IPR008271 GO:0004672|GO:0006468
Accr2g00887 372 ProSiteProfiles Protein kinase domain profile. 83 367 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr2g00887 372 Gene3D Phosphorylase Kinase; domain 1 46 158 - -
Accr2g00887 372 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 4 369 - -
Accr2g00887 372 FunFam Phytosulfokine receptor 2 159 371 - -
Accr2g00887 372 CDD STKc_IRAK 89 370 - -
Accr2g00887 372 Gene3D Transferase(Phosphotransferase) domain 1 159 372 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr2g00887 Accr-Chr2 24051455 24052573 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr2g00887 67 370 Receptor kinase-like Gene Family AT5G07280 44.590 1.33e-71 240
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xb-1 Accr2g00887 Pkinase 5.9e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr2g00887 - - qsa:O6P43_008077 493.426