Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr2g00877 ATGGGCTCTCACCAGTTTAAGCCATCCAGGTCTTTGGAGAGGTTCGAATTACAAAATGGTTATGCCGGAGATGGTGACTTTGCTGCTCCTGGACGATCCAAGGGGCAAAAATTTGATCGTACGGAGTATGGCGGGCAAAACCAGCGCGAACCCTCAAAGCATAAGGTTGAATCTGGTACTGGCAATAATCAAAGACAGGATGGTGACGTTGCTGCTGCAGAAAGAGTTAGGGATAAAGCGAAATTGAATAACAGAGAGGGAAAGAAGGATGCTGGGCGTAATCATTTGAACGTATCGAGGAAGTCTTTTGAAGATGAGATGGTTGATGGATGGCCCAAATGGCTAGTTGATAACGTTCCAAAGGAAGCATTGGCTGGCTTGACTCCCAAGAGTGCAGAATCGTATAGTATGATTAATAAGGCAGGGCAGGGAACTTATAGCAATGTTTATAAAGCTCGAGATCGGAACACTGGGGAATTAGTGGCCCTCAAGAAGGTGCGCCTTGACACATCAAAGCCTGAATGCATTAAATTCATGGCAAGAGAAATTATGATATTACGGAGACTGGATCATCCCAACGTATTAAAACTCAAAGGATTGGCTACTTCAAGAATGCATTATAGTCTTTATCTTGTTTTCGACTTCATGTATTCCGACTTGGCCACAATAACTTATCGTCCAAGTGGATTAACTGAACCACAGGTCAAGGCCTACATGCATCAATTGCTTTCAGGTCTGCAGCATTGCCATGAGAGGGGCATTTTGCATAGAGATATCAAAGGTTCAAACCTTTTGATTGATAAAAGTGGGATGCTTAAGATTGGAGATTTTGGGCTGGCCAATTACTATAATCCCAACCAAAATCAGCATCTCACAAGCAGGGTCGTGACACTATGGTACAGAGCTCCCGAGCTGCTGCTAGAAGCTACAGATTATGGAGTTGGAGTTGATTTATGGAGTGCTGGATGCCTCCTGGCAGAAATGCTTACAGGGGCTCCTATTATGCCTGGTAGAACAGAGGTGGAACAACTTCATAGAATTTTTAGGCTATGTGGCACGCCATCAGAGGATTATTGGAAAAAATTCAAAGATACCAGGAATTTTAAGCCTCCGAGGTCTTATAGATCCTCCCTTGTAGAGACTTTCAAAGATTTCCCTCCATCTTCGTTGGGTCTATTATGTACTCTGCTTTCCTTGGATCCTGCTTATCGTGGAACTGCATCTAAAGCTCTCCAAAATCAGTTTTTCTACACAAGTCCTTTGGCATGTGACCTCTCCGGTCTACCTGTGGTCTGCAATGAAGAGGAGGAGCAAGATCAAGCCGATGAACAAATCAAGCGCATGAATTCTAAACTTAGACGCTCACGTACATTACTTGAGCGTCGCAGAAAGAGTCTGGCATCTGAAAAGCCAGCCGAACCCACCATATCTTCTAAAGAGGAATGGAGAAAGAATGCTGATACATACGTCCCACCTGAAGAACTGGGTAGCACAACAACAACAACCAGTAGTACCTTATCAAGTTTGAATCCTCCTGATGCAAAGGATTTTTCTTCACCTATCTTCTCTCCAGATGTGTCCTCAGATCAAAAGCTTCTCTTAGAAACTGATTGTGATGATAATGGCGATGGCAACATTCATAAACTTCCCTCATTACCCAAGTTGAAATCACGTGCAGCCCGGGGAGAAGATACCATGCACGGATTTTTCCCCGTTACCAGGTCTTCTTCCACCAGAGATTTCAGAATTTCAAGACGAAGGGATCGTTTACTCGTTCAAATAGATGATGAGACTGCCAAAGATGACATGTAA 1812 0.4376 MGSHQFKPSRSLERFELQNGYAGDGDFAAPGRSKGQKFDRTEYGGQNQREPSKHKVESGTGNNQRQDGDVAAAERVRDKAKLNNREGKKDAGRNHLNVSRKSFEDEMVDGWPKWLVDNVPKEALAGLTPKSAESYSMINKAGQGTYSNVYKARDRNTGELVALKKVRLDTSKPECIKFMAREIMILRRLDHPNVLKLKGLATSRMHYSLYLVFDFMYSDLATITYRPSGLTEPQVKAYMHQLLSGLQHCHERGILHRDIKGSNLLIDKSGMLKIGDFGLANYYNPNQNQHLTSRVVTLWYRAPELLLEATDYGVGVDLWSAGCLLAEMLTGAPIMPGRTEVEQLHRIFRLCGTPSEDYWKKFKDTRNFKPPRSYRSSLVETFKDFPPSSLGLLCTLLSLDPAYRGTASKALQNQFFYTSPLACDLSGLPVVCNEEEEQDQADEQIKRMNSKLRRSRTLLERRRKSLASEKPAEPTISSKEEWRKNADTYVPPEELGSTTTTTSSTLSSLNPPDAKDFSSPIFSPDVSSDQKLLLETDCDDNGDGNIHKLPSLPKLKSRAARGEDTMHGFFPVTRSSSTRDFRISRRRDRLLVQIDDETAKDDM 603
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr2g00877 603 FunFam probable serine/threonine-protein kinase At1g54610 122 217 - -
Accr2g00877 603 FunFam Putative serine/threonine-protein kinase 218 454 - -
Accr2g00877 603 ProSitePatterns Serine/Threonine protein kinases active-site signature. 254 266 IPR008271 GO:0004672|GO:0006468
Accr2g00877 603 Gene3D Phosphorylase Kinase; domain 1 127 224 - -
Accr2g00877 603 MobiDBLite consensus disorder prediction 439 522 - -
Accr2g00877 603 SMART serkin_6 135 416 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr2g00877 603 MobiDBLite consensus disorder prediction 1 96 - -
Accr2g00877 603 MobiDBLite consensus disorder prediction 70 96 - -
Accr2g00877 603 Pfam Protein kinase domain 135 416 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr2g00877 603 Gene3D Transferase(Phosphotransferase) domain 1 225 456 - -
Accr2g00877 603 MobiDBLite consensus disorder prediction 557 581 - -
Accr2g00877 603 MobiDBLite consensus disorder prediction 33 56 - -
Accr2g00877 603 MobiDBLite consensus disorder prediction 440 488 - -
Accr2g00877 603 MobiDBLite consensus disorder prediction 492 514 - -
Accr2g00877 603 PANTHER CELL DIVISION PROTEIN KINASE 133 421 - -
Accr2g00877 603 SUPERFAMILY Protein kinase-like (PK-like) 130 420 IPR011009 -
Accr2g00877 603 ProSiteProfiles Protein kinase domain profile. 135 416 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr2g00877 Accr-Chr2 23601249 23605716 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr2g00877 130 458 Core Cell Cycle Gene Families AT5G10270 43.516 1.62e-92 292
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Accr2g00877 Pkinase 6.4e-67 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr2g00877 K08819 - gmx:100776854 672.93