Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr2g00845 ATGGGAAATATTGTTCCTTCTAGTGTTACCCCGTCTCTGTTATTTTCTCTGTTCTTCTTCTGGCTGATCATGGCAAAGATTGAACATGTCTCCTCTCTTTCACCTGATGGACAAGCCCTTCTTTCCCTTATATCTTCAGCTGATCCTTCTGCAAAAGCCTCCTCTTCTGTTCTCTCTTCATGGAACCCATCAAGCCTAACCCCTTGTTCATGGCATGGTGTTACTTGCTCCCCACAAGGCAGAGTTATTTCATTATCTATTCCAGATACTTTCCTTAACCTTTCTTCTCTGCCTTCCCAGCTTTCTTCTTTGTCATATCTGCAACTTCTCAATCTGTCTTCCACTAATATATCTGGCTCTATTCCACCTTCTTTTGGCCTACTCTCCCATCTTCGCCTCCTTGATATTTCTTCAAATGCTCTCACCGGTTCCATTCCTGAAGAACTCGGCAAACTCTCTTCGTTGCAGTTCCTTTACTTGAACTCCAATGGATTGACTGGAAGGATTCCTCAGCAACTAGCTAATCTTACTTCACTTCAAGTTTTCTGCCTTCAAGACAATCTCTTTAATGGGTCAATACCATCACAATTAGGCTCTTTGACATCTCTGCAAGAGTTTCGGATTGGGGGTAATCCTTATCTAAGTGGTGCAATTCCTCAACAATTAGGACTTCTCACCAATCTCACTACATTTGGGGCTGCAGCCACTGGGCTTTCAGGTGCTATTCCCTCTACATTCGGGAACTTGATCAATCTCCAAACGCTAGCACTTTATGATACAGAAATTTCGGGTTCTATACCACCAGAGCTTGGCTTGTGTTCTGAGCTAAGGAATTTGTATTTGCACATGAATAAGCTGACAGGTTCTATCCCACCTCATCTGGGTAAGTTGCAAAAGCTTACTAGCTTGCTTCTTTGGGGCAATGCCTTATCTGGGTCGATCCCTGCTGAGATTTCCAATTGTTCATCACTTGTTGTGTTTGATGCCTCTGCTAATGAACTTTTGGGTGAAATACCATACAATTTTGGAAAACTGGTGGTTCTAGAACAGCTCCATCTATCAGACAACTCTCTCACAGGGAAAATACCATGGCAACTGAGCAACTGCACTAATCTTGCTACTCTTCAGCTTGACAAGAATCAGTTATCAGGTACTATTCCATGGCAAGTTGGGAGATTGAAGTATTTGCAGTATCTTTTCTTGTGGGGTAATTCAGTGTCTGGAACCATACCTGCCTCTTTTGGTAACTGTACAGAACTTTATGCACTTGATCTTTCAAGGAACAAGCTAACAGGTTCAATTCCAGATGAAATTTTCGGCTTGAAGAAGCTGAGTAAGCTTTTGCTTCTGGGAAATTCCTTGTCTGGAGAATTACCACCAAGTGTTTCAAATTGTGAGTCTCTGGTACGGTTAAGGCTTGGAGAAAATCAACTTTCAGGACATATTCCTAGAGAGATCGGCCAACTGCAGAATCTGGTGTTCCTCGACTTGTACATGAACCATTTCTCAGGAAGCTTGCCAGTGGAGATTGGTAACATCACAGTTCTTGAGCTTCTAGATGTTCATAATAATCAGATTACTGGGGATATCCCATCTCAGCTTGGGGAGCTTGTAAATTTAGAGCAGCTAGATCTCAGTAGAAACAGTTTGACAGGTGGAATTCCTTGGAGCTTTGGAAACTTAAGTTATTTGAACAAGCTCATCCTCAACAATAATTTACTCACAGGGTCAATCCCAAAATCCATTAGAAATTTGCAGAAGCTAACGCTATTGGATTTGCGTTACAATAACTTCTCTGGAGACATCCCATCTGAGATTGGTTATGTTACAAGTTTAACCATCAGTTTGGACTTGAGCTCAAATGCATTTACAGGAGAAATCCCCGAGTCAATGAGCGGTTTGACTCAGTTACAATCACTTGATCTTTCTCATAATTTGCTTTATGGAGGAATTGAGATTCTTGGTTCCCTCACCAGTCTCACCTCCATAAACATCTCCTACAACAACTTCTCAGGTCCTATCCCAGTAACTCCTTTCTTTAGAACCCTATCTTCAAATTCATATTTGGGGAATGCCCATCTCTGTGAATCCCTCGACGGGACCACATGTTCCAGTCTGCTTAGAAGAAATGGTCTAAAGTCTGCCAAAACCATAGCTTTGATATCGGTAATTCTTGCCTCACTTACCATAGTTGTCATTGCATCTTGGATTTTGGTGACGCGAAATCACAAGAATATGATTGAAAAATCTTTGGGGACATCAACATCTGCTTCGGGAGCTGAGGATTTCTCATATCCTTGGACTTTCATCCCATTTCAAAAACTAAACTTCTCCATAGATAATATCTTGGATTGCTTGAAGGATGAGAATGTGATTGGAAAGGGTTGCTCCGGTGTTGTATACAGGGCTGAAATGGCCAATGGGGAGTTGATAGCAGTAAAGAAGCTTTGGAAAGCAAACAAAGAGGAAGAAACTGTGGACTCTTTTGCTGCAGAAATTCAGATTCTCGGGCACATCCGGCATAGGAACATTGTGAGGTTCCTGGGTTATTGTTCTAACAGAAGTGTTAAGCTTCTTCTCTATAATTACATACCAAATGGCAACCTAAGACAGCTGTTGCAAGGGAATAGGTATCTAGACTGGGAAACTCGGTACAAGATTGCTGTCGGGTCGGCTCAGGGTCTAGCTTACCTTCATCATGACTGTTCACCAGCGATCCTTCACAGAGATGTTAAATGCAATAACATACTTCTAGATTCCAAATTTGAGGCATATCTGGCAGATTTTGGTCTCGCCAAGCAGATGAGTTCACCAAATTATCACCATGCAATGTCCAGAGTGGCTGGATCTTATGGTTATATTGCCCCAGAGTATGGCTATACCATGAATATAACAGAGAAGAGTGATGTCTACAGTTATGGAGTGGTTTTGCTTGAGATACTGAGTGGGAGAAGTGCTGTTGAGTCCCATGTTGGGGATGGAGTACACATAGTTGAGTGGGTGAAGAGGAAGATGGGAAGCTTTGAACCAGCAGTGTCAATTCTAGACACAAAGCTTCAAGGCCTACCAGATCAAATGGTGCAAGAGATGCTTCAAACTCTTGGGATTGCCATGTTCTGTGTCAACTCTTCGCCAGCTGAACGACCAACAATGAAGGAGGTGGTGGCTCTGTTAATGGAGGTGAAGAGCCCACCTGAGGAGGTGGGAAAGACCTCTCAGCCTCTAATAAAGCAGTCCTCAAATCAAAGTTAA 3252 0.425 MGNIVPSSVTPSLLFSLFFFWLIMAKIEHVSSLSPDGQALLSLISSADPSAKASSSVLSSWNPSSLTPCSWHGVTCSPQGRVISLSIPDTFLNLSSLPSQLSSLSYLQLLNLSSTNISGSIPPSFGLLSHLRLLDISSNALTGSIPEELGKLSSLQFLYLNSNGLTGRIPQQLANLTSLQVFCLQDNLFNGSIPSQLGSLTSLQEFRIGGNPYLSGAIPQQLGLLTNLTTFGAAATGLSGAIPSTFGNLINLQTLALYDTEISGSIPPELGLCSELRNLYLHMNKLTGSIPPHLGKLQKLTSLLLWGNALSGSIPAEISNCSSLVVFDASANELLGEIPYNFGKLVVLEQLHLSDNSLTGKIPWQLSNCTNLATLQLDKNQLSGTIPWQVGRLKYLQYLFLWGNSVSGTIPASFGNCTELYALDLSRNKLTGSIPDEIFGLKKLSKLLLLGNSLSGELPPSVSNCESLVRLRLGENQLSGHIPREIGQLQNLVFLDLYMNHFSGSLPVEIGNITVLELLDVHNNQITGDIPSQLGELVNLEQLDLSRNSLTGGIPWSFGNLSYLNKLILNNNLLTGSIPKSIRNLQKLTLLDLRYNNFSGDIPSEIGYVTSLTISLDLSSNAFTGEIPESMSGLTQLQSLDLSHNLLYGGIEILGSLTSLTSINISYNNFSGPIPVTPFFRTLSSNSYLGNAHLCESLDGTTCSSLLRRNGLKSAKTIALISVILASLTIVVIASWILVTRNHKNMIEKSLGTSTSASGAEDFSYPWTFIPFQKLNFSIDNILDCLKDENVIGKGCSGVVYRAEMANGELIAVKKLWKANKEEETVDSFAAEIQILGHIRHRNIVRFLGYCSNRSVKLLLYNYIPNGNLRQLLQGNRYLDWETRYKIAVGSAQGLAYLHHDCSPAILHRDVKCNNILLDSKFEAYLADFGLAKQMSSPNYHHAMSRVAGSYGYIAPEYGYTMNITEKSDVYSYGVVLLEILSGRSAVESHVGDGVHIVEWVKRKMGSFEPAVSILDTKLQGLPDQMVQEMLQTLGIAMFCVNSSPAERPTMKEVVALLMEVKSPPEEVGKTSQPLIKQSSNQS 1083
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr2g00845 1083 ProSitePatterns Protein kinases ATP-binding region signature. 792 815 IPR017441 GO:0005524
Accr2g00845 1083 PRINTS Leucine-rich repeat signature 634 647 - -
Accr2g00845 1083 PRINTS Leucine-rich repeat signature 420 433 - -
Accr2g00845 1083 Gene3D Transferase(Phosphotransferase) domain 1 864 1076 - -
Accr2g00845 1083 FunFam Probable LRR receptor-like serine/threonine-protein kinase At1g34110 33 196 - -
Accr2g00845 1083 FunFam LRR receptor-like serine/threonine-protein kinase RCH1 767 863 - -
Accr2g00845 1083 ProSitePatterns Serine/Threonine protein kinases active-site signature. 906 918 IPR008271 GO:0004672|GO:0006468
Accr2g00845 1083 Gene3D Phosphorylase Kinase; domain 1 757 863 - -
Accr2g00845 1083 SMART LRR_typ_2 537 560 IPR003591 -
Accr2g00845 1083 SMART LRR_typ_2 634 661 IPR003591 -
Accr2g00845 1083 SMART LRR_typ_2 176 200 IPR003591 -
Accr2g00845 1083 SMART LRR_typ_2 249 273 IPR003591 -
Accr2g00845 1083 SMART LRR_typ_2 345 369 IPR003591 -
Accr2g00845 1083 SMART LRR_typ_2 417 441 IPR003591 -
Accr2g00845 1083 SMART LRR_typ_2 128 152 IPR003591 -
Accr2g00845 1083 SMART LRR_typ_2 465 489 IPR003591 -
Accr2g00845 1083 SMART LRR_typ_2 297 321 IPR003591 -
Accr2g00845 1083 SMART LRR_typ_2 585 609 IPR003591 -
Accr2g00845 1083 ProSiteProfiles Protein kinase domain profile. 786 1076 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr2g00845 1083 MobiDBLite consensus disorder prediction 1064 1083 - -
Accr2g00845 1083 Pfam Leucine rich repeat N-terminal domain 34 77 IPR013210 -
Accr2g00845 1083 FunFam LRR receptor-like serine/threonine-protein kinase RCH1 212 435 - -
Accr2g00845 1083 SUPERFAMILY L domain-like 56 407 - -
Accr2g00845 1083 SUPERFAMILY RNI-like 303 669 - -
Accr2g00845 1083 Pfam Leucine Rich Repeat 348 369 IPR001611 GO:0005515
Accr2g00845 1083 Pfam Leucine Rich Repeat 539 561 IPR001611 GO:0005515
Accr2g00845 1083 FunFam LRR receptor-like serine/threonine-protein kinase RCH1 864 1076 - -
Accr2g00845 1083 SUPERFAMILY Protein kinase-like (PK-like) 771 1059 IPR011009 -
Accr2g00845 1083 Gene3D Ribonuclease Inhibitor 235 441 IPR032675 -
Accr2g00845 1083 Gene3D Ribonuclease Inhibitor 94 234 IPR032675 -
Accr2g00845 1083 FunFam Putative LRR receptor-like serine/threonine-protein kinase 436 705 - -
Accr2g00845 1083 Pfam Protein kinase domain 788 1055 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr2g00845 1083 SMART serkin_6 786 1062 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr2g00845 1083 Gene3D Ribonuclease Inhibitor 442 706 IPR032675 -
Accr2g00845 1083 Gene3D Ribonuclease Inhibitor 30 93 IPR032675 -
Accr2g00845 1083 Pfam Leucine rich repeat 396 454 IPR001611 GO:0005515
Accr2g00845 1083 Pfam Leucine rich repeat 106 165 IPR001611 GO:0005515
Accr2g00845 1083 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 344 1058 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr2g00845 Accr-Chr2 22226864 22230603 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr2g00845 32 1062 Receptor kinase-like Gene Family AT5G56040 45.977 0.0 851
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Accr2g00845 Pkinase 1.7e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr2g00845 - - gmx:100819611 1766.9