Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr2g00813 ATGACGGTGGCGGTGGATTCTTCTCCAGAGTCTTTCAGCCAGATGATGGCTTCCATGCCGGGGTTCCGATTCCATCCTACAGATGAGGAACTAGTCATGTACTATCTGAAGAGGAAGATGTGTAGGAGAAGGCTGAAGCTCGATGTAATTCTTGAAACTGATGTCTACAAGTGGGATCCTGAGGAATTGCCTGGGCAGTCAGTGCTAAAAACTGGTGATAGGCAATGGTTCTTTTTCAGTCCTAGAGACAGAAAATATCCTAATAGTGGTAGGACCAATCGAGCAACAAGACATGGGTACTGGAAAGCAACAGGGAAGGATCGTAGCATTACCTACAATTCTCGGGCGGTTGGGGTGAAAAAGACGCTGGTTTTCTATAGAGGTAGAGCACCACATGGTGAGCGAACTGATTGGGTTATGCATGAGTACACGTTGGAAGAAGAAGAGCTTGCTAGATGCCAGGATTGTAAGGACTATTATGCACTTTACAAGGTGTTCAAGAAAAGCGGACCCGGTCCTAAAAATGGTGAACAGTATGGCGCGCCATTTAAAGAAGAAGAATGGGTAGATGATGACTTTGTAGATTTTAATGTTAATTCAGCTGGCAGGGAGGCTCAAATTTCACACTTTGATGAGGGTACTTCTGTTGATACTGTGACTTCTAATGGTCTAGAACAGCCTTTTTTTGATGAACTCGATGTGATCTTGAAAAAAATGATGGATGAGCAGATTCCTGACCTGCCCCTCCTGTGTCCTGCTTTACCTCAGGTTGCTGCTGAAGAAACACAGAGTGTGGTGGTGGATCAAATTTCTAATGAGGTGGCATTTGCTGAGCCAATCAGAATGTTTCATTCAAGCGATCACTACTGTGACCCTACCCAATCAGTTATCTCTGAAGCACCTGAAGTCACCTCCGGTCCCAGTGTTCAAGTAGAGGAGCCTCTCCTTCACGAGGATGACTTCTTGGAAATGAATGATCTCATTGATCCTGAACCAGCATTGCCCAGAATAGAAAATCCTTTGGAGAACTTAGAGTTTGAAGATGGTTTAAGTGAACTTGACTTGTACTTTGATGCAGAGATGTTTCTTCGTGACATGGGGCATATTGACCAGGGAACTGTTTCACATCCTCATATGAATACTTTTGACACTAATGTTGTGAATCCGCATTATCAGTCTCTGCCCCCTGGAGACAATGGAGATCCAATTGAACTCTGGATGCTTCATGAAAGGCAGCTCATGAGTTCAGCGGAGCATGCTAATGTTTCTTACTCTTCATCAACCTCAGGTGGGGGTTATGAATCTGCCAGCTTGCCTGCTGAAGGTAATCATAATCAAAGTAGCATTGTGAGAGAAGTTCCTGCAAGTAGATTGTCTTCTGCTCTCTGGGGCTTCCTTGAGTCAATACCTACCACTCCTGCATCGGCTGCCGAAAATGCAAATCGTGCTCTTGAGCGGGTGTCTAGTTTTAGTAGGGTGAGAGATAATGTGAAGCAGGCAAGCATTGCTGCTGCTGCCGTTGCTAATGAAACTGCAATTGTGAAGAGAGCAGGTAAAGGAAGGGGAATCTTCTTCTTCTTGCCAGTTCTTGTTGCTTTATGTGCTTTTTTATGGGTTTCTATGGGAACATTGAGACTACTTGGGAGATTCACTCCTTGA 1659 0.4467 MTVAVDSSPESFSQMMASMPGFRFHPTDEELVMYYLKRKMCRRRLKLDVILETDVYKWDPEELPGQSVLKTGDRQWFFFSPRDRKYPNSGRTNRATRHGYWKATGKDRSITYNSRAVGVKKTLVFYRGRAPHGERTDWVMHEYTLEEEELARCQDCKDYYALYKVFKKSGPGPKNGEQYGAPFKEEEWVDDDFVDFNVNSAGREAQISHFDEGTSVDTVTSNGLEQPFFDELDVILKKMMDEQIPDLPLLCPALPQVAAEETQSVVVDQISNEVAFAEPIRMFHSSDHYCDPTQSVISEAPEVTSGPSVQVEEPLLHEDDFLEMNDLIDPEPALPRIENPLENLEFEDGLSELDLYFDAEMFLRDMGHIDQGTVSHPHMNTFDTNVVNPHYQSLPPGDNGDPIELWMLHERQLMSSAEHANVSYSSSTSGGGYESASLPAEGNHNQSSIVREVPASRLSSALWGFLESIPTTPASAAENANRALERVSSFSRVRDNVKQASIAAAAVANETAIVKRAGKGRGIFFFLPVLVALCAFLWVSMGTLRLLGRFTP 552
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr2g00813 552 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 18 211 - -
Accr2g00813 552 SUPERFAMILY NAC domain 14 168 IPR036093 GO:0003677|GO:0006355
Accr2g00813 552 ProSiteProfiles NAC domain profile. 18 168 IPR003441 GO:0003677|GO:0006355
Accr2g00813 552 Gene3D NAC domain 27 170 IPR036093 GO:0003677|GO:0006355
Accr2g00813 552 MobiDBLite consensus disorder prediction 419 446 - -
Accr2g00813 552 FunFam Nac domain-containing protein 86 27 171 - -
Accr2g00813 552 Pfam No apical meristem (NAM) protein 20 145 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr2g00813 Accr-Chr2 20350620 20354201 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr2g00813 5 549 NAC Transcription Factor Family AT1G34190 43.986 2.59e-139 413
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Accr2g00813 NAM 5.8e-36 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr2g00813 - - gmx:100794925 590.112