Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr2g00779 ATGTTCGAGATGCTTCTGTTTGCTGTGCTCTTGTTGCTGATTACAGCTCAAATGGCAACTTCTGCCTCACATGTACACCACCTTCCTGGATTTGAAGGGCCTCTTCCTTTTCATCTTGAAACTGGGTATGTGGGAGTAGGAGAATCAGAAGAAGTGCAATTGTTCTACTATTTTATACCGTCTGAAAGAAACCCTAAAGAAGATCCTCTTATGCTTTGGATAACTGGGGGTCCTTGCTGCTCTTCATTGTCAGGACTTCTACTTGAAATAGGCCCAATAGCATTTGCAGTTGAGGAATACAAAGCGGGGCAAGTGCCCAAGTTAAACTTGAGGCCCTGGGCATGGACAAAGGTATGTAGCATCATTTTTGCAGATTTGCCCGTTGAAACTGGATTCTCTTATTCAAAAACACCCAATCCTCCACGAGGTGATTATGAATTAGTTCACCATGCCCATCAGTTTCTTCGAAAGTGGCTTTTGGAACACCCGGAATATTCCTCAAATCAAGTATACCTTGGGGCTGACTCGTACTCTGGCATCACTGTCCCTCCTATTGTTCAAGAAATTTCTAATGGAAACGAAAGAGGCCTTGACCCATGGATAAATATTCAGGGATACTTGCTGGGGAATCCTTTGACAACTAGGAACGACATTGATTATAAAATAGAGCTTGCTCATAGAATGGCACTTGTTTCTGATGAATTGTACATGTCGTGGCTGAAAAATTGTATAGATTCTCCAAACGAATCATCATGTTCAAGAGTGAAGGACTACTACAAGAAGCTCAGTTCAGGAATTAATGTTTCCAATATTTTGGATCCCAAATATTGCGATACTTGGGTTCCACCTAAAGCAATTGAAGATTCTTGGATGCGACGATCACTTGTTGAGAACTTTCACGAGCATTTACCACCTTTGAGTTGCGAAAGTTACCCATATTTTCTAATCAACTACTGGGTTAATTATGAGGGCGTTTCTAAGGCTGTGCATGCTCGAAAGGGAAGCGTAGGGAAATGGCAACGTTGCAATGACGAAAATTATGTGAAGGACATCCCTAGCAGCTTTGAGTATCATGCAAATCTCAGTAAGAAAGGTTATCGTTCCTTGATATACAGTGGTGATCATGACCTGGCTATTCCTTATTTCACAACTCAAGAGTGGATTAGAGCTTTGAATTACTCCATTATTGATGATTGGAGGCCATGGCTTTCTAAAGGTCAAGTTGCAGGATACACGAGGACTTACGCTAATCAAATGACATTTGCAACAGTAAAGGGTGCAGGACATCTTGCTCCAGAATACAAACCAGAAGAATGCTTTGTGATGTTTAGTAGGTGGATTTCTAAGAAGCCTCTGTAG 1359 0.4157 MFEMLLFAVLLLLITAQMATSASHVHHLPGFEGPLPFHLETGYVGVGESEEVQLFYYFIPSERNPKEDPLMLWITGGPCCSSLSGLLLEIGPIAFAVEEYKAGQVPKLNLRPWAWTKVCSIIFADLPVETGFSYSKTPNPPRGDYELVHHAHQFLRKWLLEHPEYSSNQVYLGADSYSGITVPPIVQEISNGNERGLDPWINIQGYLLGNPLTTRNDIDYKIELAHRMALVSDELYMSWLKNCIDSPNESSCSRVKDYYKKLSSGINVSNILDPKYCDTWVPPKAIEDSWMRRSLVENFHEHLPPLSCESYPYFLINYWVNYEGVSKAVHARKGSVGKWQRCNDENYVKDIPSSFEYHANLSKKGYRSLIYSGDHDLAIPYFTTQEWIRALNYSIIDDWRPWLSKGQVAGYTRTYANQMTFATVKGAGHLAPEYKPEECFVMFSRWISKKPL 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr2g00779 452 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 23 436 IPR001563 GO:0004185|GO:0006508
Accr2g00779 452 SUPERFAMILY alpha/beta-Hydrolases 25 451 IPR029058 -
Accr2g00779 452 Gene3D alpha/beta hydrolase 18 281 IPR029058 -
Accr2g00779 452 PRINTS Carboxypeptidase C serine protease (S10) family signature 124 134 IPR001563 GO:0004185|GO:0006508
Accr2g00779 452 PRINTS Carboxypeptidase C serine protease (S10) family signature 158 183 IPR001563 GO:0004185|GO:0006508
Accr2g00779 452 PRINTS Carboxypeptidase C serine protease (S10) family signature 111 123 IPR001563 GO:0004185|GO:0006508
Accr2g00779 452 PRINTS Carboxypeptidase C serine protease (S10) family signature 419 432 IPR001563 GO:0004185|GO:0006508
Accr2g00779 452 FunFam Carboxypeptidase 307 451 - -
Accr2g00779 452 FunFam Serine carboxypeptidase-like 19 18 282 - -
Accr2g00779 452 Pfam Serine carboxypeptidase 29 448 IPR001563 GO:0004185|GO:0006508
Accr2g00779 452 FunFam Carboxypeptidase 355 449 - -
Accr2g00779 452 Gene3D - 309 452 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr2g00779 Accr-Chr2 18730001 18737632 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr2g00779 19 48 Calmodulin-binding Proteins AT2G22960 66.667 2.84e-06 45.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr2g00779 K16296 - gmx:100792006 548.51