Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr2g00771 ATGGCATCTCCTCATATTACACCCTTGGAACACTTGATCGAAGAAGAGACATCTCCTCCTATTTCGAATTTGGAAGAAACAATCGAAGAAGACAGTTTCTATATCAGATTCACTGTTGAAGAACATGGGAGCATGGGAAGTTCTCCTGATGATACAGAAAATCTTTTAATGATAAAGATTTTTGATGTGTTTGAATCTCCTTTCATTATACCTTGCAGCGAAGTACTCCAAAACGTTCCAGAATTTCTTCATAACACTGTATCTGACTACCTTTCTGAAAGAGACCTACAATCTTTGGCATTTGAAATCACATCTTCTTATCAAAGAGTCCAATATGCTACTGGTGAAACCACTCCTCCTCATCGCTTAATACCATTAAATGTGCATTTTAATGTTGATTCTGCTTTTGGTCAATATGCACCACTATTTTACGTTCTTGAACATCCCGTTCTTCAACATGCCTCTCCATATGAAGACCATCATCAAGATATGATTGATAATGTTAATGATGATTCAGAGTTAACAGAAATCTTTGAAGCCATAGATCAATCTATGCAACAATTGTCTCTGGTTCCAGCATCTGAAGAAGCTATGGCATCACTAAAGAAAATAAAAATGCCTCATGAAGAAATTAAAGCAGACATATGCAGTATTTGCTTAGAAAATTTTGATGATGGTGGTGCCGATGTTTCTGCAACACCGTGTGACCATTTTTATCACAATATTTGTATTGTGAAATGGCTGGAAACAAGTCATACATGTCCATTATGTCGCTACCAAATGTCTACCATATAA 795 0.3623 MASPHITPLEHLIEEETSPPISNLEETIEEDSFYIRFTVEEHGSMGSSPDDTENLLMIKIFDVFESPFIIPCSEVLQNVPEFLHNTVSDYLSERDLQSLAFEITSSYQRVQYATGETTPPHRLIPLNVHFNVDSAFGQYAPLFYVLEHPVLQHASPYEDHHQDMIDNVNDDSELTEIFEAIDQSMQQLSLVPASEEAMASLKKIKMPHEEIKADICSICLENFDDGGADVSATPCDHFYHNICIVKWLETSHTCPLCRYQMSTI 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr2g00771 264 PANTHER E3 UBIQUITIN-PROTEIN LIGASE PRAJA 154 261 - -
Accr2g00771 264 Pfam Ring finger domain 215 258 IPR001841 -
Accr2g00771 264 SUPERFAMILY RING/U-box 203 262 - -
Accr2g00771 264 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 179 263 IPR013083 -
Accr2g00771 264 CDD RING-H2_PA-TM-RING 216 258 - -
Accr2g00771 264 SMART ring_2 216 257 IPR001841 -
Accr2g00771 264 SMART ringv_2 215 258 IPR011016 GO:0008270
Accr2g00771 264 ProSiteProfiles Zinc finger RING-type profile. 216 258 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr2g00771 Accr-Chr2 18392517 18393311 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr2g00771 176 261 C3H Transcription Factor Family AT1G18760 35.955 4.31e-14 67.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr2g00771 - - pcin:129298487 188.734