Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr2g00762 ATGGCGGTCAATGCTTCAGCTAATTCCAACGCCGGTGTTAATGGTGGTCATCAGTTCGGCGACACCACGCTCACCAAGGTTTTTGTTGGTGGATTGGCTTGGGAGACTCCCAAGGATGCCATGAGAGAGCATTTTCAGAAGTACGGCGAGATCCTTGAGGCCGTCATTATCTCCGATAAGGCCACCGGCAGATCCAAGGGCTATGGCTTCGTGACCTTTAAGGAAGCTGAAGCTGCAAAGAAGGCTTGTGAGGATCCTACGCCGATCATCAATGGCCGCCGAGCCAACTGCAATCTGGCTTCACTCGGCGCGCGACGCTCTAGGTCCACCAACACTTCACCGCCTCGTCAACAAGGATCGAACGGCGGAGGACCAAGGAACGCCCAAAGCGCACCACCCCCGCCAGCCAATCACGCCCCGTGGTATTATCCAGTGGGGACCCCTGCTTCGCATTTTCATCATCACCACCACCCCCAACCTGTTCCTCTATATGGGTACACCCCAACGTACGTTCCAACTGACATAAATTACAACCAGAAGCTAAGCTACACTGGCGGTGGGCCCTACATGAATGGTGGTTACTACTCTCCAATGTATCCGAGCCAGGCTATGGTGAGTGGAAACACATTGATGCCGATGTACCCTCTTTATCAATACCATCAAACTCACACTATGGGCCTACCTGCCCATATCTTCCAGCCAACTACAGCGGGGCACGTGGCAGTCATGTCGAAGCCCGCGTCCATCACTCCGAACACAGTTTGTTTGGGTGTGGAATGA 780 0.5385 MAVNASANSNAGVNGGHQFGDTTLTKVFVGGLAWETPKDAMREHFQKYGEILEAVIISDKATGRSKGYGFVTFKEAEAAKKACEDPTPIINGRRANCNLASLGARRSRSTNTSPPRQQGSNGGGPRNAQSAPPPPANHAPWYYPVGTPASHFHHHHHPQPVPLYGYTPTYVPTDINYNQKLSYTGGGPYMNGGYYSPMYPSQAMVSGNTLMPMYPLYQYHQTHTMGLPAHIFQPTTAGHVAVMSKPASITPNTVCLGVE 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr2g00762 259 MobiDBLite consensus disorder prediction 104 127 - -
Accr2g00762 259 FunFam Putative RNA-binding protein ARP1 19 107 - -
Accr2g00762 259 CDD RRM_RBM24_RBM38_like 25 100 - -
Accr2g00762 259 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 25 102 IPR000504 GO:0003723
Accr2g00762 259 Gene3D - 20 131 IPR012677 -
Accr2g00762 259 SMART rrm1_1 26 98 IPR000504 GO:0003723
Accr2g00762 259 MobiDBLite consensus disorder prediction 104 140 - -
Accr2g00762 259 SUPERFAMILY RNA-binding domain, RBD 22 127 IPR035979 GO:0003676
Accr2g00762 259 PANTHER BOULE-RELATED 4 236 - -
Accr2g00762 259 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 27 84 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr2g00762 Accr-Chr2 18141268 18144073 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr2g00762 21 101 C2H2 Transcription Factor Family AT2G19380 41.975 3.73e-16 75.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr2g00762 - - pper:18785076 345.125