Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr2g00754 ATGGAGCAGGAACACGAAGAGCATGAAGTGTACGGAGGCGATATCCCCGACGACGCAGAGATGGATGCAGATTTCAGAGTTGAAGACGAAGAAGACCAAGAAGGACACCCACATGACCCCAATCACTCTAATAAGGACTTGGAGGACATGAAGAAGAGGCTCAAGGAAATTGAGGAAGAAGCTAGTGCTCTTCGCGAAATGCAGGCTAAGGTTGAGAAAGAGATGGGTGCTGTTCAAGATTCAAGTGGTTCCTCTGCAAGTCAAGCTGAAAAGGAGGAAGTGGATTCCCGGTCAATCTATGTTGGTAATGTTGACTATGGATGTACACCTGAAGAAGTCCAGCAACATTTTCAGTCTTGTGGAACTGTGAACAGAGTGACGATATTGACAGACAAATTTGGTCAACCAAAAGGATTCGCTTATGTTGAGTTTGTTGAGGTTGATGCTGTTCAGAATGCTCTCTTGTTAAATGAATCAGAGTTGCATGGTCGTCAATTGAAGGTCTCTGCTAAGCGTACAAACGTTCCTGGATTGAAACAGTATCGTGGAAGAAGACCTATGGGTTTTCGACCTAGAATGCCTTACATGCCTGCCCCATTCTATCCTCCATATGGTGGTTATGGGAGGTTTCCGAGGTACAGGCGTCCTACGCGTTACAGGCCATACTAG 669 0.4589 MEQEHEEHEVYGGDIPDDAEMDADFRVEDEEDQEGHPHDPNHSNKDLEDMKKRLKEIEEEASALREMQAKVEKEMGAVQDSSGSSASQAEKEEVDSRSIYVGNVDYGCTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVEVDAVQNALLLNESELHGRQLKVSAKRTNVPGLKQYRGRRPMGFRPRMPYMPAPFYPPYGGYGRFPRYRRPTRYRPY 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr2g00754 222 SUPERFAMILY RNA-binding domain, RBD 87 195 IPR035979 GO:0003676
Accr2g00754 222 CDD RRM_II_PABPs 98 169 - -
Accr2g00754 222 MobiDBLite consensus disorder prediction 1 15 - -
Accr2g00754 222 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 99 167 IPR000504 GO:0003723
Accr2g00754 222 MobiDBLite consensus disorder prediction 30 73 - -
Accr2g00754 222 MobiDBLite consensus disorder prediction 1 96 - -
Accr2g00754 222 Gene3D - 16 178 IPR012677 -
Accr2g00754 222 Coils Coil 44 74 - -
Accr2g00754 222 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 97 173 IPR000504 GO:0003723
Accr2g00754 222 SMART rrm1_1 98 169 IPR000504 GO:0003723
Accr2g00754 222 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4B/4H 18 193 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr2g00754 Accr-Chr2 17895663 17903121 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr2g00754 98 169 Eukaryotic Initiation Factors Gene Family AT2G36660 35.526 3.51e-09 54.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr2g00754 K14396 - qsa:O6P43_008768 315.464