Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Accr2g00718 | ATGGCTCGGTCTGCGAGGGGCCAGCAACAAGAATTGGAGGACGATGACGAAGATCACCTGACTGGAAATGGCTCTTCTTCGTCCAAAGTGAAGGTGGATGAAGCGACTAGAGAGCAGCGGGTTAACGCGCATCGTTCTAAGCATTCAGAAACTGAGCAGCGTAGAAGGAGCAAGATAAATGAAAGATTTCAGATTCTGAGAGATCTCATTCCTCAAAATGATCAAAAAAGGGATAAGGCTTCTTTCTTGTTAGAGGTTATTGAGTATATTCAATTTTTACAGGAGAAAATACAAATGTATGAGCAATCTTACCAAGGGTGGAATCAAGAGCCAATGAAATTAATTCCTTGGAGAAATCATCGTGGACCTACAGATAATGTCATATCACAGGCTATACAAAATGGTTCTGGTCATGAAAACAATGATGTTGTCTCTCTGTCACTGCCCTTAAATGCACAGAATACAATGGAATCTGACTTGTCATCAACAATTATTCATAAGGCTGCCCCCCTTGATTTATCTTCTGATGCAGTTCCCTTGAGTATGCAAATGCGATTGGACATGTTTGATCTGACTGCGAACAGTGGCATTGCAGCCCAACATTTACATGAAGCAGTCTCTAACACTGAGAACATGCCTTCCCATAGTCAGCCTCAGTTGTGTCTTGACGAACCTAAGGAGGGTGCATATGATTTTCGAAATAATACATTGAAGGAACAGGACGAGCTGAAATATGAAAGTGAATCGGTTAGCATCTCAAGAGCCTATTCTCAGGGCATATTGGACACTTTTGTGCAATCATTGCGGTCTTCAGGTGTAGATTTATCTGACACCAACGTATCAGTACAAATTGATGTAGGAAGACGATCAATTGCCTCCACATCCTGCTCAAAGGATCATGAGAACCAATTTGTGAACATCCCATCAATGACATGTTCAGGAGTTGATTACTACAGTGAAGATTCTGAACAAGCTCTTAAGAGGCTCAGAACAGAAGAGAGTTAG | 1005 | 0.4169 | MARSARGQQQELEDDDEDHLTGNGSSSSKVKVDEATREQRVNAHRSKHSETEQRRRSKINERFQILRDLIPQNDQKRDKASFLLEVIEYIQFLQEKIQMYEQSYQGWNQEPMKLIPWRNHRGPTDNVISQAIQNGSGHENNDVVSLSLPLNAQNTMESDLSSTIIHKAAPLDLSSDAVPLSMQMRLDMFDLTANSGIAAQHLHEAVSNTENMPSHSQPQLCLDEPKEGAYDFRNNTLKEQDELKYESESVSISRAYSQGILDTFVQSLRSSGVDLSDTNVSVQIDVGRRSIASTSCSKDHENQFVNIPSMTCSGVDYYSEDSEQALKRLRTEES | 334 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Accr2g00718 | 334 | Gene3D | - | 41 | 114 | IPR036638 | GO:0046983 | |
Accr2g00718 | 334 | SUPERFAMILY | HLH, helix-loop-helix DNA-binding domain | 44 | 120 | IPR036638 | GO:0046983 | |
Accr2g00718 | 334 | Pfam | Helix-loop-helix DNA-binding domain | 45 | 94 | IPR011598 | GO:0046983 | |
Accr2g00718 | 334 | MobiDBLite | consensus disorder prediction | 31 | 56 | - | - | |
Accr2g00718 | 334 | ProSiteProfiles | Myc-type, basic helix-loop-helix (bHLH) domain profile. | 43 | 93 | IPR011598 | GO:0046983 | |
Accr2g00718 | 334 | FunFam | BHLH domain class transcription factor | 41 | 113 | - | - | |
Accr2g00718 | 334 | Coils | Coil | 90 | 110 | - | - | |
Accr2g00718 | 334 | SMART | finulus | 49 | 99 | IPR011598 | GO:0046983 | |
Accr2g00718 | 334 | CDD | bHLH_AtBIM_like | 42 | 118 | - | - | |
Accr2g00718 | 334 | PANTHER | BES1-INTERACTING MYC-LIKE PROTEIN | 4 | 332 | IPR044295 | GO:0003700|GO:0006351|GO:0046983 | |
Accr2g00718 | 334 | MobiDBLite | consensus disorder prediction | 1 | 56 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Accr2g00718 | Accr-Chr2 | 17184120 | 17189269 | Dispersed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Accr2g00718 | 3 | 290 | Basic Helix-Loop-Helix Transcription Factor Gene Family | AT1G69010 | 37.755 | 1.82e-51 | 171 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | bHLH | Accr2g00718 | HLH | 1.5e-15 | No_clan |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Accr2g00718 | - | - | gmx:100791730 | 402.905 |