Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr2g00685 ATGGACGAGGAGGAGCCAATAACTTTTTCTTCCAGACGATCAAGGACAGAAAAAAGAAAGATCTCCTATAGTAATAGAGTGGCTACTTCTGCTGGTCCTTCTCGTCACAGAAGAAGGCTTGTAAAAAGGAATGTTCAAGAAGTTTCAGCTCCTTTACTTGATTTAAACTCTGGGTACCTTAGCAGAATGGATAGATTAAATATGGATGCTGTAGCTTCTTCTAGCCTTTCTGGTTGTGTCTCTAGTGATACTATCTTAGAAAATAGAGAAGGATCAGATATTGACTCATATAACCAAAACATAGCTGTCAATACAGCATCAAATGCCACTCGACAAATCAAAGATTCAAATAATTTATCAAGTTCAAGAATTTCAGCTCTATGCGTACAAGATGCCTTGCCTACTGCAGAACAAATATCTATAGACGAGTGTTATGAAAAGTCCGCAGATAGTATCCTGGATGGTCATGCGGCTGACTTACCTACGTCGACAGAGTTGTCATGTGTCATATGTTTGACAGAATTCAGCTCAACGCGGGGGGTTTTGCCATGTGGACATAGGTTTTGTTATTCTTGTATCCAGAGATGGGTTGATCACAGGACTACAATGGGAAAAGTCTCAACTTGTCCCTTGTGCAAGTCAAGGTTTGACAACATCATTAAATATGAGGATATGGCTGTGGATCAAAAGATATATTCCCAAACAATCCCATGTGGCATTCCGATCTCAGATATCAATTTACTTATGCATCGGGAACAACCAAATTATGGTTTTGAGGCAGGTGCTTGTGTTGTTTGCCGGGGACGAGAACCTGAGGATTTGCTCATGAGTTGCCATCTTTGCCATATTCGACAAATCCATTCCTATTGCCTGGACCCTCCTTTATTGCCCTGGACATGCGATCACTGTAAGGATCTTCGGATGCTTTATCATAATCATTCACATTAG 948 0.4072 MDEEEPITFSSRRSRTEKRKISYSNRVATSAGPSRHRRRLVKRNVQEVSAPLLDLNSGYLSRMDRLNMDAVASSSLSGCVSSDTILENREGSDIDSYNQNIAVNTASNATRQIKDSNNLSSSRISALCVQDALPTAEQISIDECYEKSADSILDGHAADLPTSTELSCVICLTEFSSTRGVLPCGHRFCYSCIQRWVDHRTTMGKVSTCPLCKSRFDNIIKYEDMAVDQKIYSQTIPCGIPISDINLLMHREQPNYGFEAGACVVCRGREPEDLLMSCHLCHIRQIHSYCLDPPLLPWTCDHCKDLRMLYHNHSH 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr2g00685 315 MobiDBLite consensus disorder prediction 1 37 - -
Accr2g00685 315 SUPERFAMILY RING/U-box 161 220 - -
Accr2g00685 315 ProSitePatterns Zinc finger RING-type signature. 184 193 IPR017907 -
Accr2g00685 315 MobiDBLite consensus disorder prediction 1 22 - -
Accr2g00685 315 PANTHER F5A8.9 PROTEIN 8 312 - -
Accr2g00685 315 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 162 232 IPR013083 -
Accr2g00685 315 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 250 314 IPR013083 -
Accr2g00685 315 SMART ring_2 168 212 IPR001841 -
Accr2g00685 315 ProSiteProfiles Zinc finger RING-type profile. 168 213 IPR001841 -
Accr2g00685 315 Pfam Ring finger domain 167 213 IPR001841 -
Accr2g00685 315 SUPERFAMILY FYVE/PHD zinc finger 259 305 IPR011011 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr2g00685 Accr-Chr2 15722144 15725362 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr2g00685 86 215 C3H Transcription Factor Family AT3G55530 29.104 3.21e-06 45.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr2g00685 - - pcin:129291305 471.085