Gene search
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Accr2g00683 | 414 | ProSiteProfiles | Zinc finger RING-type profile. | 267 | 312 | IPR001841 | - | |
| Accr2g00683 | 414 | SMART | ring_2 | 267 | 311 | IPR001841 | - | |
| Accr2g00683 | 414 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 261 | 331 | IPR013083 | - | |
| Accr2g00683 | 414 | Pfam | Ring finger domain | 266 | 312 | IPR001841 | - | |
| Accr2g00683 | 414 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 349 | 413 | IPR013083 | - | |
| Accr2g00683 | 414 | ProSitePatterns | Zinc finger RING-type signature. | 283 | 292 | IPR017907 | - | |
| Accr2g00683 | 414 | SMART | BRCT_7 | 1 | 74 | IPR001357 | - | |
| Accr2g00683 | 414 | Gene3D | BRCT domain | 1 | 89 | IPR036420 | - | |
| Accr2g00683 | 414 | ProSiteProfiles | BRCT domain profile. | 1 | 84 | IPR001357 | - | |
| Accr2g00683 | 414 | SUPERFAMILY | RING/U-box | 260 | 319 | - | - | |
| Accr2g00683 | 414 | SUPERFAMILY | FYVE/PHD zinc finger | 358 | 404 | IPR011011 | - | |
| Accr2g00683 | 414 | SUPERFAMILY | BRCT domain | 1 | 85 | IPR036420 | - | |
| Accr2g00683 | 414 | PANTHER | F5A8.9 PROTEIN | 104 | 411 | - | - | |
| Accr2g00683 | 414 | Pfam | twin BRCT domain | 4 | 66 | IPR001357 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Accr2g00683 | Accr-Chr2 | 15721226 | 15725362 | Tandem |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Accr2g00683 | 38 | 90 | Core DNA Replication Machinery Family | AT4G02110 | 48.148 | 7.31e-11 | 62.4 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Accr2g00683 | - | - | pcin:129291305 | 632.869 |