Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr2g00663 ATGGGAAAGCCAAGAAGAACACAGACTCTCCTCTGTTTCATGGTACTTGTTGTCTGGTTTTCTTGTTCTTCTTCTGCAAATGCTTTGCTCTCTCCTAAAGGAGTGAACTTTGAAGTTCAAGCTTTGATGGGTATAAAAGCTTCTCTGGTTGATCCTCATGGAGTTTTAGATACTTGGGATGGAGATTCTGTTGATCCTTGTAGCTGGACCATGGTCACTTGTTCTTCTGAGAACCTTGTCGTTAGCCTGGGCACTCCAAGTCAAAGTTTATCTGGTACTTTGTCTCCCACCATAGGAAACCTCACAAACCTTCAAACTCTGTTGTTACAGAATAACAATATAACAGGTACAATTCCTGCAGAGTTAGGGAAGCTTTCAAAGCTGCAGACTTTAGATCTGTCAAATAACTTGTTCGATGGGGAAATTCCTGCCTCTTTAGGCCACATGAGCAAGCTGCAATACTTGAGACTCAACAATAATAGTCTTTCTGGTGAATGTCCAGAGTCACTGGCCAACATGACACAGCTTGCTTTCCTTGACTTGTCCTACAACAATCTGAGTGAGCCTGTGCCCAGAATTCTGGCCAAATCATTCAGCCTTGTTGGAAATCCCCTCATCTGTGATACTGGGAAAGAAGAAACCTGTCATGGGATGACACTTATGCCTATGTCCATGAACTTAAACAATACCCAACAAGATGCTGAACCTTCTGGCAGACAAAGAACACACAGAGTAGCAATTGCCTTTGGTTTGAGCCTAGGATGTCTGTGTCTCATAGTAGTTTGTTTTGGACTATTTCTCTTGTGGAGGCATAAGCATAATCAACAACCATTCTTCGATGTCAAAGATCGTCATCATGAGGAAGTGTATCTGGGAAACTTGAAGAGGTTCCATTTCAGAGAGCTGCAGATAGCTACAAACAATTTCAGCAGCAAGAACATATTAGGAAAAGGAGGGTTCGGACACGTGTACAAGGGTGTTCTTCAAGATGGGACAGTGGTGGCAGTGAAGAGGCTAAGAGATGGGAATGCCATTGGAGGAGAAATACAGTTTCAGACTGAAGTTGAGATGATAAGCTTGGCAGTACACAGAAACCTCCTCAGACTCTATGGTTTCTGTATGACTCCCTCTGAAAGGCTTCTTGTTTACCCTTATATGCCTAATGGCAGTGTTGCTTCTCGCCTCAAAGGAAAACCAGTGTTGGACTGGGGAACAAGGAAGCAGATAGCATTAGGAGCAGCAAGGGGTTTACTATACCTACATGAGCAATGTGATCCAAAGATAATACATAGGGATGTGAAGGCAGCAAACATATTGCTTGATGAGTACTATGAGGCAGTGGTTGGAGATTTTGGATTGGCAAAGCTTTTGGATCATCAAGACTCTCATGTGACCACTGCAGTGAGGGGCACCGTGGGCCACATTGCTCCTGAGTACCTCTCCACAGGGCAGTCCTCTGAGAAGACTGATGTCTTTGGATTTGGTATTCTCCTCCTTGAGTTGATCACTGGTCTTAGGGCCCTTGACTTTGGAAAAGCTGCCAACCAGAAAGGAGCCATGCTTGATTGGGTGAAGAAGATTCATCAAGAGAAGAAGCTTGAACTACTAGTGGACAAGGATTTGAAGAGCAACTATGATAGAATAGAGCTAGAAGAAATGGTGAAAGTGGCACTTCTTAGTACTCAATACCTTCCAGGACAGAGACCTAAAATGTCAGAACTAGTGAGAATGCTTGAAGGAGATGGACTTGCAGAAAGATGGGAAGCTTCTCAAAGCAAAGATCATAATCATAACGACACAACAACCACAAGCAAATCCACTAATAAACATGCCCATCAATTCTCTTCTTCAGATCGTTATTCCGATCTCACTGATGATTCTTCTTTGTTAGTCCAAGACATGGAGCTTTCAGGTCCAAGGTGA 1923 0.4337 MGKPRRTQTLLCFMVLVVWFSCSSSANALLSPKGVNFEVQALMGIKASLVDPHGVLDTWDGDSVDPCSWTMVTCSSENLVVSLGTPSQSLSGTLSPTIGNLTNLQTLLLQNNNITGTIPAELGKLSKLQTLDLSNNLFDGEIPASLGHMSKLQYLRLNNNSLSGECPESLANMTQLAFLDLSYNNLSEPVPRILAKSFSLVGNPLICDTGKEETCHGMTLMPMSMNLNNTQQDAEPSGRQRTHRVAIAFGLSLGCLCLIVVCFGLFLLWRHKHNQQPFFDVKDRHHEEVYLGNLKRFHFRELQIATNNFSSKNILGKGGFGHVYKGVLQDGTVVAVKRLRDGNAIGGEIQFQTEVEMISLAVHRNLLRLYGFCMTPSERLLVYPYMPNGSVASRLKGKPVLDWGTRKQIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGLRALDFGKAANQKGAMLDWVKKIHQEKKLELLVDKDLKSNYDRIELEEMVKVALLSTQYLPGQRPKMSELVRMLEGDGLAERWEASQSKDHNHNDTTTTSKSTNKHAHQFSSSDRYSDLTDDSSLLVQDMELSGPR 640
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr2g00663 640 SMART LRR_typ_2 125 148 IPR003591 -
Accr2g00663 640 SMART LRR_typ_2 173 196 IPR003591 -
Accr2g00663 640 SMART LRR_typ_2 149 172 IPR003591 -
Accr2g00663 640 SMART LRR_typ_2 101 124 IPR003591 -
Accr2g00663 640 FunFam Somatic embryogenesis receptor-like kinase 1 386 598 - -
Accr2g00663 640 Gene3D Phosphorylase Kinase; domain 1 278 385 - -
Accr2g00663 640 FunFam Somatic embryogenesis receptor kinase 1 278 385 - -
Accr2g00663 640 Pfam Leucine Rich repeats (2 copies) 102 136 IPR025875 -
Accr2g00663 640 Gene3D Transferase(Phosphotransferase) domain 1 386 598 - -
Accr2g00663 640 ProSitePatterns Serine/Threonine protein kinases active-site signature. 428 440 IPR008271 GO:0004672|GO:0006468
Accr2g00663 640 Pfam Leucine rich repeat N-terminal domain 38 75 IPR013210 -
Accr2g00663 640 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 14 589 - -
Accr2g00663 640 FunFam Putative LRR receptor-like serine/threonine-protein kinase 35 217 - -
Accr2g00663 640 SUPERFAMILY L domain-like 38 200 - -
Accr2g00663 640 Gene3D Ribonuclease Inhibitor 35 217 IPR032675 -
Accr2g00663 640 ProSiteProfiles Protein kinase domain profile. 309 564 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr2g00663 640 MobiDBLite consensus disorder prediction 588 640 - -
Accr2g00663 640 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 22 - -
Accr2g00663 640 Pfam Protein kinase domain 310 550 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr2g00663 640 SUPERFAMILY Protein kinase-like (PK-like) 286 579 IPR011009 -
Accr2g00663 640 Pfam Leucine rich repeat 145 186 IPR001611 GO:0005515
Accr2g00663 640 MobiDBLite consensus disorder prediction 601 631 - -
Accr2g00663 640 SMART serkin_6 309 564 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr2g00663 640 ProSitePatterns Protein kinases ATP-binding region signature. 315 337 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr2g00663 Accr-Chr2 15387449 15393077 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr2g00663 7 640 Receptor kinase-like Gene Family AT5G16000 75.587 0.0 973
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Accr2g00663 Pkinase 3.6e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr2g00663 - - gmx:100798412 1043.11