Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr2g00656 ATGGCGTCGAAAATGGAAATTGATAATTCTAACGATCCTTCTCCGTCTTCGCCAAAGAATATATACAAAGATCCAGATGACGGCCGGCAGCGATTTTTGCTTGAGCTGGAATTTGTTCAGTGCCTTGCTAATCCCACCTACATTCACTATTTGGCTCAGAATCGATATTTAGAGGATGAAGCATTCATTGGATACTTGAAGTACCTTCAATACTGGCAACGTCCTGAATACATCAAATTTATTATGTATCCTCATTGCCTTTTCTTTCTTGAACTTCTTCAGAATGCAAACTTTCGAAATGCAATGGCGCATCCTGGCAATAAGGAACTTGCGCATAGACAACAATTTTACTTCTGGAAGAACTATAGGAACAATAGGCTAAAACACATTTTACCACGGTCACTCCCTGAATCTAGCGTCACAACTGCACCTCCTGTGGCTGCCTCAACTCCATCTCAACCGCCAGTGACTGCTCTGCCACCAGTACCAGCTGCAAATGTTCCGGCGACAGTACCATCTGCTCAGGCTCTTTCTCCGATGCCATATGGTATGCCGCCTGGATCTGCCCTTGCGAAAAATGATATGAGGAATCCTGCACTTGATAGGAGGAAGAGAAAGTAA 621 0.4396 MASKMEIDNSNDPSPSSPKNIYKDPDDGRQRFLLELEFVQCLANPTYIHYLAQNRYLEDEAFIGYLKYLQYWQRPEYIKFIMYPHCLFFLELLQNANFRNAMAHPGNKELAHRQQFYFWKNYRNNRLKHILPRSLPESSVTTAPPVAASTPSQPPVTALPPVPAANVPATVPSAQALSPMPYGMPPGSALAKNDMRNPALDRRKRK 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr2g00656 206 MobiDBLite consensus disorder prediction 148 167 - -
Accr2g00656 206 Gene3D Mediator of RNA polymerase II, submodule Med31 (Soh1) 17 119 IPR038089 -
Accr2g00656 206 PANTHER MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 31 1 206 IPR008831 GO:0003712|GO:0006355|GO:0016592
Accr2g00656 206 MobiDBLite consensus disorder prediction 1 22 - -
Accr2g00656 206 MobiDBLite consensus disorder prediction 136 206 - -
Accr2g00656 206 Pfam SOH1 30 122 IPR008831 GO:0003712|GO:0006355|GO:0016592
Accr2g00656 206 MobiDBLite consensus disorder prediction 1 18 - -
Accr2g00656 206 FunFam Mediator of RNA polymerase II transcription subunit 31 18 119 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SOH1 Accr2g00656 Med31 2.9e-35 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr2g00656 K15153 - gmx:100527879 327.791