Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr2g00620 ATGGAGAACTTCGATTCAAAGAGCGGTTTCTGTTCAGTTTCTAGAACTTTCCACAGCCTCAGACCCCCCGTTCATCTTCCTCCTCCTCACTCTCCTCTCTCTGCTTCACAATACGCTCTCTCTCTCCATCTCAAATCGCCCTGGTCCGACTCAGTCCCCGCCCTTATCGACTCAGTCTCCGGCCACCGAGTTTCCTTCTCCGACTTCATCCGTTCCTCACAAACCTTAGCCTTTAATCTTCAATCTCTCGCAGGCCTCTCCAAAGGCGACACAGCCTTTGTATTATCCCCAAATCTCATTCAGGTCCCGATCCTCTACTTCGCTCTACTTTCCCTCGGTGTTGTCGTCTCTCCGGCGAACCCACTCAGCACACGCGCCGAAATTTCCCACCTCCTCCAGCTATCGTCGCCGGTGATTGCCTTCACGACGGCCTCCACAGCACATAACCTTCCGCAAAATCTGCGACTCAGAGTCATCCTTCTCGACTCACCTGAGTTCGACTCGCTGATGACAACAACAAGCGCCGTGAAACCAGTGAGCCGACGCGTTGAGGTGAGCCAATCAGACATAGCCGCGATTTTGTACTCTTCGGGGACCACGGGGAAGGTAAAGGGAGTAATGCTGACTCACCGGAATCTGATAGCATCAGCGGCGAGTTATGACGCGGCTCGAACTCAGAGAGAAACTCCGGCGGTTATCCTCTACACAATGCCGTATTTTCACGTGTACGGTTTCACGTATTGTCTGAGGTCGGTAGTGTTGTCGGAGACGGTGGTGTTGATGGAGAGATTCAGAATGGAGAAGATGTTGCGGGCGGTGGATGAGTTCCGAGTGACTCACCTCGCGGTGGCTCCGCCGGTGGTTGTGGCGATGGCGAAAGGAGATGTAACGGACGGTTACGATTTGAGCTCGTTGGAAGGCATGTCTTGTGGGGCGGCTCCGCTAGGAAAGGACGCCATCGCGGCTTTCAAATCGAAGTTCCCCAAAGTTTTGCTCGTACAGGGATATGGGCTAACAGAAACAACTGCATCAATTTGTCGAACGATAGGAGAAGTGGAGAGCAATATAACAGGAACAACGGGGAGGCTCGTAGCTGGGGTTGATGCCAAAATTGTGGACCCACACACTGGACTGGCCCTTTCTCCTGGCGAGGAAGGCGAACTTTGGCTTAGAGGACCTCCTATAATGCAAGGTTATGTAGGGGATGCAGAAGCAAACTCGACCATTTTCGTTGATGGGTGGTTGAGGACAGGAGACTTGTGCTATTTTGATCACCAAGGCTACCTTTACGTTGTTGATAGATTGAAAGAATTGATCAAATACAAGGGATATCAGATTGCTCCTGCGGAGCTGGAAAACTTGCTTCATTCCCATCCACATATCCAGGACGCTGCAGTTATTCCTTACCCTGATGAAGAAGCAGGGCAAGTGCCTATGGCCTTTGTGGTGAGACAACCCAACAGTTCACTAAGCGAAGCAGACGTAGTTGACTTTGTTGCCAAACAGGTTTCACCTTATAAAAAAATAAGGCGCATATCATTTGTGACCTCCATACCAAAGAATGCAGCTGGAAAAATTTTGAGGAAAGAATTGAGTAAAACTGTCCTCCATCATCAATATATATCTAAATTGTAA 1635 0.5003 MENFDSKSGFCSVSRTFHSLRPPVHLPPPHSPLSASQYALSLHLKSPWSDSVPALIDSVSGHRVSFSDFIRSSQTLAFNLQSLAGLSKGDTAFVLSPNLIQVPILYFALLSLGVVVSPANPLSTRAEISHLLQLSSPVIAFTTASTAHNLPQNLRLRVILLDSPEFDSLMTTTSAVKPVSRRVEVSQSDIAAILYSSGTTGKVKGVMLTHRNLIASAASYDAARTQRETPAVILYTMPYFHVYGFTYCLRSVVLSETVVLMERFRMEKMLRAVDEFRVTHLAVAPPVVVAMAKGDVTDGYDLSSLEGMSCGAAPLGKDAIAAFKSKFPKVLLVQGYGLTETTASICRTIGEVESNITGTTGRLVAGVDAKIVDPHTGLALSPGEEGELWLRGPPIMQGYVGDAEANSTIFVDGWLRTGDLCYFDHQGYLYVVDRLKELIKYKGYQIAPAELENLLHSHPHIQDAAVIPYPDEEAGQVPMAFVVRQPNSSLSEADVVDFVAKQVSPYKKIRRISFVTSIPKNAAGKILRKELSKTVLHHQYISKL 544
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr2g00620 544 Gene3D - 30 436 IPR042099 -
Accr2g00620 544 FunFam 4-coumarate--CoA ligase 2 437 538 - -
Accr2g00620 544 Gene3D - 437 538 IPR045851 -
Accr2g00620 544 CDD 4CL 22 531 - -
Accr2g00620 544 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 10 533 - -
Accr2g00620 544 Pfam AMP-binding enzyme C-terminal domain 450 525 IPR025110 -
Accr2g00620 544 ProSitePatterns Putative AMP-binding domain signature. 193 204 IPR020845 -
Accr2g00620 544 SUPERFAMILY Acetyl-CoA synthetase-like 53 537 - -
Accr2g00620 544 Pfam AMP-binding enzyme 53 441 IPR000873 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr2g00620 Accr-Chr2 14706609 14713200 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr2g00620 4 533 Monolignol Biosynthesis Gene Families AT5G63380 51.009 0.0 559
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr2g00620 K01904 - qsu:111992510 708.368