Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr2g00609 ATGGCAGAAGTTGAGGACAGTCAACCCCTTGTCTTTGATAATGGGACAGGAGTGGTGAAGGCTGGATTTTCTAGAGACGATGCACCACGTGCTGTGTTTCCCAGCATTGTAGGTCGTCCTCGTCACAGAGCGATGGTGGGCATGGGCCTAAAGGATGAGTATTTTGGTGACGAGGCACAATCTAAGAGGGGTATTCTGACTCTCAAGTATCCAATTGAGCATGGAATTGTTAGCAACTGGGATGATATGGAAAAGATCTGGCGTCATACCTTCAAAAATGAGCTTCGTGTTGCCCCAGAAGAGCACCCAGTTCTTTTAACTGAGGCTCCATGTAATCCCAAGGCTAATCGTGAGAAGATGACTCAAATTATGTTTGAGACTTTTAACACCCCTGCTATGTATGTTGCCATTCAAGCTGTTCTTTCACTGTATGCTAGTGGTCGTACAACTGGTATTGTGTTGGACTCTGGTGATGGTGTCAGCCACGCGGTTCCTATCTATGAGGGTTATGCTCTTCCTCATGCCATCCTTCGCCTTGACCTGGCTGGTCGTGACCTCACTGAATACATGATGAGAATTCTGACTGAACGTGGGTATTCTTTTACCACCTCAGCAGAGCGGGAAATTGTTAGGGATGTGAAGGAAAAGCTAGCTTACATTGCCCTTGATTATGAGCAAGAGCTAGAGACATCCAAGACCAGCTCTGCAGTGGAGAAGAGCTATAAGTTGCCTGATGACGAGGTCATCACTATTGGTGCTGAACGTTTCAGATGTCCAGAGGTTTTGTACCAACCATCTTTGATTGGAAAGGATGCAGCTGGCATTCATGAGATAACATACAACTCCATTAAGAAGTGTGATGTCGATATTAGGAAAGACTTGTATGGTAACATTGTCCTCTCAGGAGGTTCAACTCTGTTCCCAGGCATTGCTGACAGAACGAGCAAGGAAATATCTGCATTAGCCCCAAGAAGTATGAAGATCAAGGTGGTTGCACCACCTGAGAGAAAGTACAGTGCCTGGATTGGTGGTTCCATTTTGGCATCTCTGAGCACCTTCCAGCAGATGTGGATTGCAAAGGCAGAGTATGACGAATTTGGACCGTCAATTGTGCAAAGGAAATGCTTCTAA 1131 0.4589 MAEVEDSQPLVFDNGTGVVKAGFSRDDAPRAVFPSIVGRPRHRAMVGMGLKDEYFGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWRHTFKNELRVAPEEHPVLLTEAPCNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHAVPIYEGYALPHAILRLDLAGRDLTEYMMRILTERGYSFTTSAEREIVRDVKEKLAYIALDYEQELETSKTSSAVEKSYKLPDDEVITIGAERFRCPEVLYQPSLIGKDAAGIHEITYNSIKKCDVDIRKDLYGNIVLSGGSTLFPGIADRTSKEISALAPRSMKIKVVAPPERKYSAWIGGSILASLSTFQQMWIAKAEYDEFGPSIVQRKCF 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr2g00609 376 CDD NBD_sugar-kinase_HSP70_actin 10 182 - -
Accr2g00609 376 FunFam Putative actin-related protein 5 340 368 - -
Accr2g00609 376 SMART actin_3 7 376 IPR004000 -
Accr2g00609 376 ProSitePatterns Actins signature 2. 357 365 IPR004001 -
Accr2g00609 376 Gene3D - 10 370 - -
Accr2g00609 376 Gene3D Actin; Chain A, domain 4 181 272 - -
Accr2g00609 376 Gene3D - 139 339 - -
Accr2g00609 376 FunFam Actin, muscle 181 272 - -
Accr2g00609 376 Pfam Actin 6 376 IPR004000 -
Accr2g00609 376 SUPERFAMILY Actin-like ATPase domain 148 376 IPR043129 -
Accr2g00609 376 FunFam Actin, alpha skeletal muscle 3 155 - -
Accr2g00609 376 FunFam Major actin 259 339 - -
Accr2g00609 376 PRINTS Actin signature 50 61 IPR004000 -
Accr2g00609 376 PRINTS Actin signature 28 37 IPR004000 -
Accr2g00609 376 PRINTS Actin signature 237 253 IPR004000 -
Accr2g00609 376 PRINTS Actin signature 116 129 IPR004000 -
Accr2g00609 376 PRINTS Actin signature 62 84 IPR004000 -
Accr2g00609 376 PRINTS Actin signature 141 160 IPR004000 -
Accr2g00609 376 PANTHER ACTIN 9 369 IPR004000 -
Accr2g00609 376 SUPERFAMILY Actin-like ATPase domain 6 154 IPR043129 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr2g00609 Accr-Chr2 14539898 14541576 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr2g00609 1 376 Cytoskeleton Gene Families AT3G12110 88.859 0.0 697
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr2g00609 K10355 - egr:104420889 678.707