Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr2g00600 ATGGCTGACTTTATCACTCCAGTCTCCGACATCCTAACTCGTTTGTGTGGCTACTGCTCCAAATGGGCAGATTCGATACGCAATCTAGGAGACAACCTCGACTCCCTCAAAAATGCTTCAAATGAACTCGATGACAGGTATCGTGATGTCAAGAGGAAGGTCGAAACGGAGGAGAATAAGCCAGATCAAGAGCTAGAGGTTTTGAACGAGGCAACAGGTTGGATGGGCAGAGTAGAAGTCCTACAAAATGAAGTCAAGGCCATTTTGCAGCAAGGTAATCTAGAAATACAAGCCAAGTGTTTTGGAGGTCGTTGTCCCAAAAATTGTCGGGCTAGCTACAAGCTAAACAAAATGGTCACCAAGAAGTTGAGTGACATTAATGATCTTAGCAGCAAAGGACATTTTGATGTTGTAGCAAAAAAGTATGTTCGTGATTTGTTCGAGAAGCTTCCTGTGGATGAGACTGTGGGTGCAGAATCAACATTTGAGGAACTACAGTCATGGTTTCAGAACGATGAGGTTGGTATCATTGGTTTGTATGGAATGGGAGGGGTAGGCAAAACAACTCTACTCAAGAAATTCAACAATGATTTCCTTTCAACTAAAGGAGACTATATGGTCATTTGGTCTGTGGCCTCTAAAGACGCAGATCCACGAAAAATTCAAGATGATATTAGGAAGAAGTTGCGTGTCCCGGATGATAATTGGGAAAATGCTAATGATAAGGCTCGTTTGTTATACAACATCTTAGAGAAGAAGAAATTTGTGTTGTTATTAGACGATGTATGGGAAAGAATTGATTTGTTGAAATTGGGGGTTCCTTCTCCTAATAATCGTTGCAAGATAATATTTACAACTCGATCGTTTGAGGTATGCAGCCTAATGGATGCAAAGAAGTGCATAGGAGTAAAGCGCCTCACACCAAATAAAGCATTTGAGTTGTTCAGGGAGAAAGTGGGTGAAATTACTCTTGAAAACCCTCTTATATTACCTCTTGCAATGCAAGTGGTGACAGAGTGTAAAGGGTTACCACTTGCTCTATGTGTTGTTGGACGTGCAATGGCAAACAAGAAGACTCCCAATGAATGGAAGCGTGCTTTAGAAATTCTAAGGAGTTATCCCTCGAAGATCCGAGGTATCGTTGAAGATGTATATTACTTGCTTGAATTTAGTTATGATAGATTGCAAAATGATACATACAAGTCATGTTTTTTGTATTGTGCTCTATTCCCTGAGGACTACAACATTAAAAAAGGAGAGCTTATTTTGCTGTGGATAGCGGAAGGCTTTTTGGCTGAATTTGATAATGATATATATGAAGCACGTAAGCAAGGAGAAGATATAATTTCAAGTCTGAAGTACGCTTGCTTATTAGAAGATGGTGAGGAAGAAGACACAGTTAAGATGCATGATGTAATTCGAGATCTTGCTCTTTGGATAGCTTGTGATCATGATGAAAAGACAAGATTTTTGGTACATGATTCTTCTAAGACTAGTGGCCTTCAAGTATACAATCGTGCAAAGTGGGAAGAGGTAGAAAAGTTATCATGGTGGGGCGAACTTGAAAAATATATAAATGACTTATCACAAGTACCTCATTGTCCTAATCTTGTCACTCTACTTATTAGGGATGTTTGGACAACATCCTTTCCAACTAAGGCATTTGTCCTTCCAAATACTATTAGAGTGTTGGACTTGTCAGGTTGTGGTAGTGGTCGTCTTGCAACAAGAGATCTACCTTCAACAATCGGGGACCTTGTAAACCTACAACACTTGAACCTATCCCACACTAATATAGGGCATTTGCCAAAGGAGTTGAAGAAGCTGAAGAAGCTGAGGTTCTTGTTGCTGGATGGCTTGCCAAATCTTGAAATACCAAAGGGAGTTATAGCCGGTATGTTATCACTTCAAGCTTTTAGTATGATGGCACTTAAATTTTCAGTGGTTGATGAACCTATGTTGTTGCACGAGCTAGAAGGATTAGATCATCTTCAAGATATACGCATTTCTGTCTATAGCCCATCCTTTACTGAAAAAATACACATCTCCTCAAAATTGCAAATGTGCACGTGTAAGCTACTTGTTGTAAAATGCTCAAAGCTCGATGCTTTGTTCTTGGCATTGGGAAAAATGGAGCATCTTGAATCATTAGCAGTTGCAGGGAGCAACATATCAAAGGATACTGAAGCTGCAAATATTGGGAGGGGCTCATTATTTCAGAAAGATGGTCATGTAATCATGCTTCGCTACTTGTATCTCGAGTCTTGTCGTAATGTACTTGACTTGAATTGGCTTAAACATACTCCATACCTTGAAATCCTTGAATTAAGATACTGCCACTTATTGGAGGAAGTTATAAGTGAAGACATTGGGATAGTGAAAAATAATCTGTTTTCTAATCTCACTTCTCTTCGTTTGGAAGCTCTCAAAAACTTAAGGAGCATTTGTACAATGACATTAGAGTTTCCTAGTTTGAAGGAAATTAAAGTATACGGGTGTCCCAATTTAAAGAAGCTGCCATTTAATTCTCAAAGTGCTTTGAAAAATCTACGACTCTGTGGTGGAGATATTGGCTGGTTTAATGAATTGAAATGGGAAGACGAAGACACCAAAAATCTTCTTTCATCAAAATTTGATACTTGGTCTCCATTTGCGTAA 2658 0.3913 MADFITPVSDILTRLCGYCSKWADSIRNLGDNLDSLKNASNELDDRYRDVKRKVETEENKPDQELEVLNEATGWMGRVEVLQNEVKAILQQGNLEIQAKCFGGRCPKNCRASYKLNKMVTKKLSDINDLSSKGHFDVVAKKYVRDLFEKLPVDETVGAESTFEELQSWFQNDEVGIIGLYGMGGVGKTTLLKKFNNDFLSTKGDYMVIWSVASKDADPRKIQDDIRKKLRVPDDNWENANDKARLLYNILEKKKFVLLLDDVWERIDLLKLGVPSPNNRCKIIFTTRSFEVCSLMDAKKCIGVKRLTPNKAFELFREKVGEITLENPLILPLAMQVVTECKGLPLALCVVGRAMANKKTPNEWKRALEILRSYPSKIRGIVEDVYYLLEFSYDRLQNDTYKSCFLYCALFPEDYNIKKGELILLWIAEGFLAEFDNDIYEARKQGEDIISSLKYACLLEDGEEEDTVKMHDVIRDLALWIACDHDEKTRFLVHDSSKTSGLQVYNRAKWEEVEKLSWWGELEKYINDLSQVPHCPNLVTLLIRDVWTTSFPTKAFVLPNTIRVLDLSGCGSGRLATRDLPSTIGDLVNLQHLNLSHTNIGHLPKELKKLKKLRFLLLDGLPNLEIPKGVIAGMLSLQAFSMMALKFSVVDEPMLLHELEGLDHLQDIRISVYSPSFTEKIHISSKLQMCTCKLLVVKCSKLDALFLALGKMEHLESLAVAGSNISKDTEAANIGRGSLFQKDGHVIMLRYLYLESCRNVLDLNWLKHTPYLEILELRYCHLLEEVISEDIGIVKNNLFSNLTSLRLEALKNLRSICTMTLEFPSLKEIKVYGCPNLKKLPFNSQSALKNLRLCGGDIGWFNELKWEDEDTKNLLSSKFDTWSPFA 885
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr2g00600 885 FunFam Probable disease resistance protein At5g66910 305 391 - -
Accr2g00600 885 Pfam NB-ARC domain 159 393 IPR002182 GO:0043531
Accr2g00600 885 Gene3D Ribonuclease Inhibitor 502 853 IPR032675 -
Accr2g00600 885 FunFam Probable disease resistance protein At1g63360 392 479 - -
Accr2g00600 885 Gene3D - 392 478 IPR036388 -
Accr2g00600 885 PRINTS Disease resistance protein signature 249 263 - -
Accr2g00600 885 PRINTS Disease resistance protein signature 340 354 - -
Accr2g00600 885 PRINTS Disease resistance protein signature 176 191 - -
Accr2g00600 885 PRINTS Disease resistance protein signature 766 782 - -
Accr2g00600 885 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 30 840 - -
Accr2g00600 885 ProSiteProfiles Leucine-rich repeat profile. 588 610 IPR001611 GO:0005515
Accr2g00600 885 Coils Coil 26 60 - -
Accr2g00600 885 Gene3D - 136 303 IPR027417 -
Accr2g00600 885 SUPERFAMILY L domain-like 463 854 - -
Accr2g00600 885 Gene3D - 306 391 IPR042197 -
Accr2g00600 885 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 141 407 IPR027417 -
Accr2g00600 885 FunFam Probable disease resistance protein At1g61300 138 300 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr2g00600 Accr-Chr2 14098737 14101394 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr2g00600 154 489 WRKY Transcription Factor Family AT5G45050 23.977 1.36e-10 63.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr2g00600 - K13459 pcin:129286803 959.518