Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr2g00570 ATGAATATTCCTTGTGATTTTCCCCACTGTTCCATCTTCTTCTTCCTTCTGCAACTACTTGTCATCATTATAACAGTTGGCGCCTATGATGAAAACAGATTCAGAAACTGCAGTAGCTTCTTCAACTGTGGAACCGTCAACGTTGGTTATCCATTCTGGGGAGACAACAGAGCTTCATACTGTGGTCAGCCTGATTTCCATCTTGCTTGCCAAGACAATACACCAAAGTTGATCGTTAATAATTCTGTCACTTACCGGATTCTGAGTTTGAGCTTAAATGATCAGAGTCTTAAAGTGGTTAGGGATGACTATTGGAAAACTATATGTCCAAGTCAATACACAAACACTACTAGCTTTGATTCCACCACCATGTTCAAGCTTGATGATGGGTTTCAAAACATGGCCTTGCTATATGATTGCCGCCTCAACTATTTTAATCCAATATTGGGTCAGTTCATCACTTCATCTACCACAGTGTGCTCCAAACAAAACGTCTACTTTGGGAGCGTACCATACAGTTTGGATTTGACTGGAATTTGCAAGGTTGTTGTTATTCCTATAGAGAATGATTATGTTAATTCGGTACTTCACTCTCAAATGGGAATTGAAGAAGCAATAAAGGAAGGTTTTTTATTAAGATGGAGTGTGGATATTGAAGAGTGTGACAAGTGTGTTAAGTCTGGTGGGAAGTGTGGGTATATGAATAAGTTCACATGTTTCTGCAACAATGGGACTCAAGGAACTACGTGTTCTTCAGTTCTAACACCTCAATTTGATGAGAAATCTACAGGCAAAAGCTCAAAAAAGACAGTTGCTCTAGGCATTGGCGTTGGAGTTGGAGCTTTTTGTGTCGTTCTTATTCTGTGTTTGATGTTTTTGGTCATGAAGAGAAGGAGGAGAAAAGTTGAACAGTTGAACAGCAATAAGAACCTCTTGTCGCCTTCATTAAGCAGTATCAATGGCGATGTAACAAAAAGCTCTGCAACTAAAACTAGTATGGCCCAAAGTGCTCCTCCTTACCCTGCTGCCTCCAAGTTTAACTCTGTGCAGAAGAGTTTTTACTTTGGAGTTCAAGTTTTTAGCTATGATGAACTTGAAGAAGCTACAAAAAATTTTGACCCCTCCATGGAACTTGGTGATGGAGGCTTCGGAGTTGTTTATTATGGAACCCTCAGAGACGGACGTGTAGTTGCAGTAAAACGCCACTATGAGACCCACGCAAAACGTGTGGATCGGTACATGAACGAGGTAGAAATTCTAGCTCGCTTACGACACGACAACCTCGTAGCTCTTTATGGATGCACATCCAGACACAGCCGAGAACTCATCCTCGTCTACGAGTACATCCCCAACGGAACCGTCGCCGACCACCTCCACGGCAAGCGATCTCGCTCATCTTTGCTTCCTTGGCCCATACGCATGAACGTTGCTGTAGAAACAGCTGAAGCACTAGCCTACCTTCACAAATCCGACGTCATCCACCGCGACGTCAAGACCAACAACATCCTCCTCGACCACGATTTTCGAGTTAAGGTTGCTGATTTCGGCCTCTCACGTTTGTTCCCTAACCAAGTCACACATGTTTCTACTGCTCCACAAGGGACACCTGGTTATGTTGACCCTGAGTATTACCAGTGCTTCCAACTAACCGATAAGAGCGATGTTTATAGCTTTGGAGTAGTACTGATCGAGCTTGTTTCGTCGTTACAAGCCGTGGATGTTTCGAGGAGTGATCGTGACATAAACTTGGCCAACATGGCGGTGGATAAGATTCAGAACAAGGCAGTGAATGAGCTGGTTGATCCGTATTTAGGGTTCGAAACCGATAATGGTGTGAGGGAGATGGTTATAGGAGTTACTGAATTGGCCTTCAGGTGTTTGCAGAAGGAGAGAGACATGAGGCCTTCCATGAAAGAGGTGGTTGCGGTGTTGAGAGAGATTCAGGGTAGGAAGAATGATAATGTGAAGGATAATAACAATAATAAAGAAGTGGTGATGATGAAGATGGATCATAAGGTAGAAGAAATGGTGCTTTTGAAAAATGGTAGTACACCAGTTTCATCGAATTCGGTTTCTGATGATTGGGTTAGTTTCTCTACTACTTCTGGGTCTAGCTCCTCACAGAATCTATTATCTCCTTTTTCTGTTGGTAAACCTTTGATTAGGCAGTAA 2172 0.4277 MNIPCDFPHCSIFFFLLQLLVIIITVGAYDENRFRNCSSFFNCGTVNVGYPFWGDNRASYCGQPDFHLACQDNTPKLIVNNSVTYRILSLSLNDQSLKVVRDDYWKTICPSQYTNTTSFDSTTMFKLDDGFQNMALLYDCRLNYFNPILGQFITSSTTVCSKQNVYFGSVPYSLDLTGICKVVVIPIENDYVNSVLHSQMGIEEAIKEGFLLRWSVDIEECDKCVKSGGKCGYMNKFTCFCNNGTQGTTCSSVLTPQFDEKSTGKSSKKTVALGIGVGVGAFCVVLILCLMFLVMKRRRRKVEQLNSNKNLLSPSLSSINGDVTKSSATKTSMAQSAPPYPAASKFNSVQKSFYFGVQVFSYDELEEATKNFDPSMELGDGGFGVVYYGTLRDGRVVAVKRHYETHAKRVDRYMNEVEILARLRHDNLVALYGCTSRHSRELILVYEYIPNGTVADHLHGKRSRSSLLPWPIRMNVAVETAEALAYLHKSDVIHRDVKTNNILLDHDFRVKVADFGLSRLFPNQVTHVSTAPQGTPGYVDPEYYQCFQLTDKSDVYSFGVVLIELVSSLQAVDVSRSDRDINLANMAVDKIQNKAVNELVDPYLGFETDNGVREMVIGVTELAFRCLQKERDMRPSMKEVVAVLREIQGRKNDNVKDNNNNKEVVMMKMDHKVEEMVLLKNGSTPVSSNSVSDDWVSFSTTSGSSSSQNLLSPFSVGKPLIRQ 723
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr2g00570 723 ProSiteProfiles EGF-like domain profile. 217 251 IPR000742 -
Accr2g00570 723 Pfam Wall-associated receptor kinase galacturonan-binding 37 101 IPR025287 GO:0030247
Accr2g00570 723 SUPERFAMILY Protein kinase-like (PK-like) 350 648 IPR011009 -
Accr2g00570 723 Gene3D Phosphorylase Kinase; domain 1 345 448 - -
Accr2g00570 723 CDD STKc_IRAK 378 647 - -
Accr2g00570 723 Pfam Wall-associated receptor kinase C-terminal 173 243 IPR032872 -
Accr2g00570 723 ProSitePatterns EGF-like domain signature 1. 239 250 IPR000742 -
Accr2g00570 723 SMART serkin_6 372 644 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr2g00570 723 Pfam Protein kinase domain 375 641 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr2g00570 723 ProSiteProfiles Protein kinase domain profile. 372 647 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr2g00570 723 Gene3D Transferase(Phosphotransferase) domain 1 449 674 - -
Accr2g00570 723 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 13 700 IPR044652 GO:0004672
Accr2g00570 723 MobiDBLite consensus disorder prediction 683 709 - -
Accr2g00570 723 ProSitePatterns Protein kinases ATP-binding region signature. 378 400 IPR017441 GO:0005524
Accr2g00570 723 FunFam receptor-like protein kinase FERONIA 339 448 - -
Accr2g00570 723 ProSitePatterns Serine/Threonine protein kinases active-site signature. 492 504 IPR008271 GO:0004672|GO:0006468
Accr2g00570 723 FunFam Wall-associated receptor kinase-like 20 449 657 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr2g00570 Accr-Chr2 13321820 13326001 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr2g00570 41 706 Receptor kinase-like Gene Family AT1G25390 39.349 5.09e-145 436
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Accr2g00570 Pkinase 3.3e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr2g00570 - - qsa:O6P43_005636 646.736