Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr2g00561 ATGGCAGATATTACTCCGACGACGTCTCTAAAACTCTTTGGCATTAACATTCACAAAGTTTCAGAATCCGATCACGAGGCCTTGAACTCCGGCGGCAACGATCACCGGAAATACGAGTGCCAATATTGCTGCCGTGAGTTTGCTAACTCACAAGCGTTGGGAGGTCACCAAAACGCACACAAGAAAGAAAGACAGCTTCTAAAGCGAGCTCAAATGCAAGCTGCCCAAACTGCTTTTTCTGCTTCACATCACAATTATATTCATCACAAGCCTATCTTATTGCCTCCACCTGATATCCTGGCTGGATCGCCGCCTCCACCACCACCTCTGTATCCGTGGCCGTACAGTGTACCACATAACCCACCGTCTCCGGTGTATCAGTCTGGGACATTCGGTGTGTGTGTGAATTCTGGTTTTTCAGGTTTGCATGATCATCTTTCACCACGGCCCTCATCTATGGCGGTATATGGTGGCTTTACAGGCAGTGATGGTGGCGAACGAGGCTTCAATTTGGATTTGCAACTTAGTCTATGA 534 0.4794 MADITPTTSLKLFGINIHKVSESDHEALNSGGNDHRKYECQYCCREFANSQALGGHQNAHKKERQLLKRAQMQAAQTAFSASHHNYIHHKPILLPPPDILAGSPPPPPPLYPWPYSVPHNPPSPVYQSGTFGVCVNSGFSGLHDHLSPRPSSMAVYGGFTGSDGGERGFNLDLQLSL 177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr2g00561 177 ProSitePatterns Zinc finger C2H2 type domain signature. 40 60 IPR013087 -
Accr2g00561 177 Gene3D Classic Zinc Finger 18 90 - -
Accr2g00561 177 SUPERFAMILY beta-beta-alpha zinc fingers 35 65 IPR036236 -
Accr2g00561 177 PANTHER ZINC FINGER PROTEIN 5 7 177 IPR044299 GO:0010090
Accr2g00561 177 ProSiteProfiles Zinc finger C2H2 type domain profile. 38 65 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr2g00561 Accr-Chr2 12947068 12947601 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr2g00561 5 107 C2H2 Transcription Factor Family AT1G67030 55.357 6.30e-30 107
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr2g00561 - - pcin:129303084 202.216