Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr2g00556 ATGGCTGCTTGCAACAACAAGGAGAAGGTTGTGTTCATTATGGGATCAACAGGCACTGGAAAAACCAAGCTTTCAATCGACTTGGGCTCACATTTCCCTTCTGAGATCATCAACGCTGACAAGATCCAAGTTTATAAAGGTTTGGATATCATCACAAACAAGATCCTGGAATCTGAGCGACGAGGAATCCCCCACCACCTCCTCGGAATCATCGAAGATCCCGAATTCGACTTCACTACTGACCATTTTTGTGACCAAGTCATCGCTGTGGTCGAGCATATCACCCAACAAGGAAACCTCCCCATGATCGTTGGAGGCTCCAACACCTACCTTGAATTCCTCGTGGAACATCCCACTTTGGAATTTCGTTCCAAATATGATTGTTGCTTCCTCTGGCTCGATGTGTCACTTGATGTCCTCTTTCCCTATCTAGACAAAAGGATAGATGAAATGCTGGAAGCGGGCTTTGTGGATGAGGCCAGGGAGTTCTACCAACCTGGGGCTGATTATTCTGCTGGAATCAGAAGAGCCATTGGTGCTCCTGAACTGGACAAGTATTTTAAGGTTGAGAACGATGTTAATGTCGACGAAGGTTGCAAGCGAGAGCTGCTCAAAGGTGCTATTAAGAGAATGAAAGAAAACACTCGTACGCTTGCTCAAGGGCAACTTGCAAAGATTCATCGTCTCAATGATGAGCTTGGTTGGGAACTGAATCGTATTGATGCTACTAAGGTATTTGAGGCTATTGCGAATGGAAGTGCGTATAAGAGTTTGTGGGAAGAAATGGTTTTTAAGCCGACCAAGGAGATTGTTCAGAGCTTTCTTGAAGGCTAA 834 0.452 MAACNNKEKVVFIMGSTGTGKTKLSIDLGSHFPSEIINADKIQVYKGLDIITNKILESERRGIPHHLLGIIEDPEFDFTTDHFCDQVIAVVEHITQQGNLPMIVGGSNTYLEFLVEHPTLEFRSKYDCCFLWLDVSLDVLFPYLDKRIDEMLEAGFVDEAREFYQPGADYSAGIRRAIGAPELDKYFKVENDVNVDEGCKRELLKGAIKRMKENTRTLAQGQLAKIHRLNDELGWELNRIDATKVFEAIANGSAYKSLWEEMVFKPTKEIVQSFLEG 277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr2g00556 277 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 7 275 IPR039657 -
Accr2g00556 277 Gene3D Crystal structure of tRNA isopentenylpyrophosphate transferase (bh2366) domain 137 237 - -
Accr2g00556 277 Gene3D - 7 275 IPR027417 -
Accr2g00556 277 FunFam Adenylate isopentenyltransferase 5, chloroplastic 137 237 - -
Accr2g00556 277 Pfam IPP transferase 123 223 - -
Accr2g00556 277 Pfam IPP transferase 43 117 - -
Accr2g00556 277 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 6 197 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr2g00556 Accr-Chr2 12692594 12693427 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr2g00556 124 276 C2H2 Transcription Factor Family AT2G27760 32.022 8.31e-22 92.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr2g00556 K10760 - gmx:121173984 362.844