Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr2g00554 ATGCGGATGAGCTGTAATGGATGCCGAGTTTTGAGAAAGGGTTGCAGTGAAAATTGTAGTATAAGGCCGTGTTTGCAGTGGATTAAAAGCCCAGAGTCTCAGGCTAATGCTACGGTGTTTCTCGCCAAGTTCTACGGCCGTGCTGGCCTCATGAACCTCGTTAACGCCGGTCCTGAACACCTTCGTCCTGCGATTTTTCGGTCTTTGTTATATGAGGCATGCGGGCGAATAGTTAACCCGATTTATGGGTCCGTCGGGTTGTTATGGTCCGGGAGCTGGCAGTTATGTCAGGCAGCCGTGGAAGCCGTCTTGAAGGGCGCTCCGATCACGCCAATCACCTCCGAGGCGGCAACGAACGGGAGGGGCCCACCTCTCAAGGCTTACGACATACGCCACGTGTCTAAGGATGAGAACTTGGCCGCGTCAAACGATGCTCAACGAGTCGTCAAAACTCGCTCCAGGTTCAAGCGCTCCGTCGGCGGCGGCGGTGGCGACAAGCCCAAAGCCAGCAACAAATCGGCCACCGGCTCGTTATCGGTTCAGCCCTCTCCTCTAGCAGTTGACGCTCCGATCAATTCCTGGACCGGGTGTTGTGCTGCTGCTGCTAAACCGGTTGTGAACCGGTCGGGGAGTCACGAGTCATCGCTGAGCCACCAGTCGGAGGCCGTTAATGAGAGCAAAGAGAGCGAGAGCATGATCTCCGTGGAGACCGCCGAGACGTCGATCCTCTTCCGAGACGAACCGGAATCCACCGGGAAGGCCAGGGAACGAACCGTCGATGAAACAACCGATATAGGCCTAGAGTTGACACTAGGGTTCGAACCGGCGTCACGTGCGAACCACGTGGTACCAGTGAAGAAGAGGAAGATCGAGTTCAGAGATAGTGAGAACTGGTCATCGTACAAAATGAACCTGGGACTTGAGTTCTAG 930 0.5538 MRMSCNGCRVLRKGCSENCSIRPCLQWIKSPESQANATVFLAKFYGRAGLMNLVNAGPEHLRPAIFRSLLYEACGRIVNPIYGSVGLLWSGSWQLCQAAVEAVLKGAPITPITSEAATNGRGPPLKAYDIRHVSKDENLAASNDAQRVVKTRSRFKRSVGGGGGDKPKASNKSATGSLSVQPSPLAVDAPINSWTGCCAAAAKPVVNRSGSHESSLSHQSEAVNESKESESMISVETAETSILFRDEPESTGKARERTVDETTDIGLELTLGFEPASRANHVVPVKKRKIEFRDSENWSSYKMNLGLEF 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr2g00554 309 PIRSF AS2 1 309 IPR017414 -
Accr2g00554 309 MobiDBLite consensus disorder prediction 209 232 - -
Accr2g00554 309 PANTHER LOB DOMAIN-CONTAINING PROTEIN 38 3 271 - -
Accr2g00554 309 Pfam Lateral organ boundaries (LOB) domain 4 103 IPR004883 -
Accr2g00554 309 MobiDBLite consensus disorder prediction 141 183 - -
Accr2g00554 309 ProSiteProfiles LOB domain profile. 3 109 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr2g00554 Accr-Chr2 12487412 12488529 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr2g00554 1 307 AS2 family AT3G02550 54.603 3.85e-103 301
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Accr2g00554 LOB 1.6e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr2g00554 - - qsa:O6P43_005610 425.631