Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr2g00545 ATGGTTGCTGCCAAGAAGACGAAGAAGACCCATGAGAGCATTAACAACAGGCTCGCTCTTGTCATGAAGAGCGGGAAGTATACCCTGGGTTACAAGACGGTCCTCAAATCCCTCAGGAACTCTAAAGGAAAACTTATTATCATTGCCAACAATTGTCCACCTCTGAGAAAGTCAGAAATTGAGTACTATGCCATGTTGGCAAAAGTCGGTGTTCACCATTACAATGGAAACAACGTGGATTTGGGAACTGCATGCGGCAAATACTTCAGAGTGTGCTGCCTCAGCATTATTGATCCCGGTGATTCGGACATTATTAAGACGATGCCCAGTGAGCAGTAA 339 0.4513 MVAAKKTKKTHESINNRLALVMKSGKYTLGYKTVLKSLRNSKGKLIIIANNCPPLRKSEIEYYAMLAKVGVHHYNGNNVDLGTACGKYFRVCCLSIIDPGDSDIIKTMPSEQ 112
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr2g00545 112 FunFam 60S ribosomal protein L30 2 108 - -
Accr2g00545 112 Gene3D - 2 108 IPR029064 -
Accr2g00545 112 SUPERFAMILY L30e-like 13 107 IPR029064 -
Accr2g00545 112 Pfam Ribosomal protein L7Ae/L30e/S12e/Gadd45 family 13 105 IPR004038 -
Accr2g00545 112 ProSitePatterns Ribosomal protein L30e signature 2. 80 100 IPR022991 -
Accr2g00545 112 Hamap 50S ribosomal protein L30e [rpl30e]. 12 109 IPR000231 GO:0003723|GO:0003735|GO:0022625
Accr2g00545 112 PANTHER RIBOSOMAL PROTEIN L30 1 111 IPR039109 GO:0003723
Accr2g00545 112 ProSitePatterns Ribosomal protein L30e signature 1. 24 48 IPR022991 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr2g00545 Accr-Chr2 12199974 12202351 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr2g00545 1 112 Cytoplasmic Ribosomal Protein Gene Family AT1G36240 85.714 3.75e-71 206
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr2g00545 K02908 - jre:109020673 226.483