Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr2g00534 ATGGATCAACCACTCACCACCAACACCACTCCGGCAACCTACCGTGGTGTTCGCATGCGAAAATGGGGCAAATGGGTGTCCGAAATCCGGGAGCCCGGTAAGAAGACGCGGATATGGTTAGGGAGCTACGACACACCGGAGATGGCTGCAGCTGCATACGACGTCGCAGCTTTACATTTCCGGGGCCAAGCCGCACGGCTCAATTTCCCAGAGCTCATCGGCAGCCTGCCCCGGCCGGCAACCTCCCGAGCTGAGGATGTGCAGCTAGCAGCACAGCAAGCAGCATTGAAGTTAAAGAGGCCGGTGATCAGAGGGCCATCGGAGTCAGGCGGTGGTACTACACGTACCGTGGCAGCGGCGCCGGTGACGGTGGGGCTGTCACCGAGCCAAATTCAGGCTATAAACGAGTCACCATTGGATTCACCAAAGATGTGGATGCAAATGGCTGCTGAAGCTGCTCTTATGATAGGGTTTGATAGCAATGACTATGACCACTATGATGAATTAGAAGAAACGCAGCATCATGAATCTTTGTGGGACTTCTGA 546 0.5495 MDQPLTTNTTPATYRGVRMRKWGKWVSEIREPGKKTRIWLGSYDTPEMAAAAYDVAALHFRGQAARLNFPELIGSLPRPATSRAEDVQLAAQQAALKLKRPVIRGPSESGGGTTRTVAAAPVTVGLSPSQIQAINESPLDSPKMWMQMAAEAALMIGFDSNDYDHYDELEETQHHESLWDF 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr2g00534 181 PRINTS Ethylene responsive element binding protein signature 14 25 IPR001471 GO:0003700|GO:0006355
Accr2g00534 181 PRINTS Ethylene responsive element binding protein signature 36 52 IPR001471 GO:0003700|GO:0006355
Accr2g00534 181 ProSiteProfiles AP2/ERF domain profile. 13 70 IPR001471 GO:0003700|GO:0006355
Accr2g00534 181 FunFam Ethylene-responsive transcription factor 2 12 71 - -
Accr2g00534 181 Pfam AP2 domain 14 62 IPR001471 GO:0003700|GO:0006355
Accr2g00534 181 CDD AP2 14 72 IPR001471 GO:0003700|GO:0006355
Accr2g00534 181 SUPERFAMILY DNA-binding domain 13 71 IPR016177 GO:0003677
Accr2g00534 181 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 11 148 - -
Accr2g00534 181 Gene3D AP2/ERF domain 13 71 IPR036955 GO:0003700|GO:0006355
Accr2g00534 181 SMART rav1_2 13 76 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr2g00534 Accr-Chr2 12093628 12094173 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr2g00534 8 180 AP2-EREBP Transcription Factor Family AT1G33760 57.062 6.16e-52 162
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Accr2g00534 AP2 1.2e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr2g00534 - - zju:107421431 212.616