Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr2g00507 ATGGCGACGTCGGATGAAGTTTCACATTTGGAGCGGATTCGTCAACATCTTCTTGGTGATTTTCCGTCCTCGGAACCCTTCTCTTCCAATCGGTATCCTGTAAAGCTCGAGGATTCTTCTTCATCGGAGTTTGATCTGAAACCGACTGTTCCCGCGCAAAGTTTGTGTTCTTATATGGTTGAAACTAGTGGTTTTGAAGATGTTGGGGAGGTTTTGAACTCCGTGTCGGAGGTTGAAATGGAGAAGAAGCCAGCGTCGCCTGAGACTGAGAAGGCTGAGTGCGATGAGTCGGCGATTTTGAGGCGGTACAGGGGCGTTCGGAGGAGGCCGTGGGGCAAGTATGCTGCGGAGATCCGTGACCCGACCCAGAAAGGGACACGGGTTTGGCTGGGTACATTTGATAATGAGATTGATGCTGCGAAGGCTTATGATTGTGCTGCTTTCAGAATGAGGGGTCGAAGAGCGATATTGAACTTTCCTCTGGAGGCCGGTGAATCTGATCCGACATCCAACCGGTGTGCCCGGAAAAGAAGAAGACACGGTTCAGCGGAGGAGGTGTCCCAAATTTCCACTGAGATTTAA 582 0.5069 MATSDEVSHLERIRQHLLGDFPSSEPFSSNRYPVKLEDSSSSEFDLKPTVPAQSLCSYMVETSGFEDVGEVLNSVSEVEMEKKPASPETEKAECDESAILRRYRGVRRRPWGKYAAEIRDPTQKGTRVWLGTFDNEIDAAKAYDCAAFRMRGRRAILNFPLEAGESDPTSNRCARKRRRHGSAEEVSQISTEI 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr2g00507 193 MobiDBLite consensus disorder prediction 165 193 - -
Accr2g00507 193 Pfam AP2 domain 102 152 IPR001471 GO:0003700|GO:0006355
Accr2g00507 193 PANTHER DNA-BINDING DOMAIN 63 172 IPR044808 GO:0003700|GO:0009873
Accr2g00507 193 SMART rav1_2 102 166 IPR001471 GO:0003700|GO:0006355
Accr2g00507 193 FunFam Ethylene-responsive transcription factor 2 101 162 - -
Accr2g00507 193 MobiDBLite consensus disorder prediction 20 43 - -
Accr2g00507 193 Gene3D AP2/ERF domain 101 162 IPR036955 GO:0003700|GO:0006355
Accr2g00507 193 SUPERFAMILY DNA-binding domain 102 162 IPR016177 GO:0003677
Accr2g00507 193 ProSiteProfiles AP2/ERF domain profile. 102 160 IPR001471 GO:0003700|GO:0006355
Accr2g00507 193 MobiDBLite consensus disorder prediction 22 43 - -
Accr2g00507 193 CDD AP2 110 160 IPR001471 GO:0003700|GO:0006355
Accr2g00507 193 PRINTS Ethylene responsive element binding protein signature 142 162 IPR001471 GO:0003700|GO:0006355
Accr2g00507 193 PRINTS Ethylene responsive element binding protein signature 103 114 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr2g00507 Accr-Chr2 11484479 11485060 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr2g00507 1 188 AP2-EREBP Transcription Factor Family AT5G07580 42.000 7.19e-41 135
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Accr2g00507 AP2 1.6e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr2g00507 - - gmx:100305726 180.259