Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr2g00501 ATGGCTGCTTCAACTTCTCCCTCTGATTTTTCTCACAATCCCTGGAATCCCTCCTCCGATTCACCCCCACCAATTTCTCTCACCGCCGATCAGCTCAAGCACTGTAATGAAGCGCTTGCCAGCTTTAGGGCGGGAACGACGGAGATGATCAATCAAGAGTTTGCACGCTTGGAGGCCAATGCGATAACACTAGCTGAGCTGAAGAGAAGATGCACTGTAGCTCTAAATGACGTAAATCTACGCAAAAATCGGTATCCGGAAGATGTCCTGCCATTTGACGATAACAGGGTTGTTCTAGAATCAAGTTCAGATCATAGACCTACTGCCATGGGATATATCAATGCAAGCTTTCTCTCGATCTCTTCCTTTGAGAGTGTTTCTAAGTTTATAGCTACACAAGGTCCACTGCCACATACTTGTGAGGATTTCTGGGAAATGGTAATCCAATACAGTTGCCCCGTCATTGTGAATCTCACTGTGCTCGTTGAACCCAAGATTGAAAAGTGTGACGATTATTTTCAAGCTGATGACGGTGAACCTATGAAGTTTGGTAACATCTCTGTTGTTTGTGAATGGATGAAAACTGTTGAAAACTCATTGGTACTGCGCCATTTGAAGGTGCATAGAAAGGAAGATCCTCCCTTTTCTGTTTTGCACATTCATTATCCTGAGTGGCCTGATTATGGAGTTCCCAACGATACACTTGCTGTGCGTGCAATTTTTAAGAGATTGTACCATTTACCGCCAAAATTTGGCCCAATAGTGGTGCATTGCAGTGCAGGTATTGGAAGAACTGGAGCATACTGTGCTGTTCACAATACAATTCAGAGAATTCTTGTTGGTGAAAAGTCTGCCTTGGATCTTTATAATACCTTATTTGAATTCAGGTCGCAGCGATATGGAATGGCTGAGAAACAGAGCCAGTACAATTTCTGCTATGAAGCTATAGTAGAGGCACTGGATGAACTTGTTTCTAATCATCATCAGCAATGA 993 0.432 MAASTSPSDFSHNPWNPSSDSPPPISLTADQLKHCNEALASFRAGTTEMINQEFARLEANAITLAELKRRCTVALNDVNLRKNRYPEDVLPFDDNRVVLESSSDHRPTAMGYINASFLSISSFESVSKFIATQGPLPHTCEDFWEMVIQYSCPVIVNLTVLVEPKIEKCDDYFQADDGEPMKFGNISVVCEWMKTVENSLVLRHLKVHRKEDPPFSVLHIHYPEWPDYGVPNDTLAVRAIFKRLYHLPPKFGPIVVHCSAGIGRTGAYCAVHNTIQRILVGEKSALDLYNTLFEFRSQRYGMAEKQSQYNFCYEAIVEALDELVSNHHQQ 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr2g00501 330 ProSitePatterns Tyrosine specific protein phosphatases active site. 256 266 IPR016130 GO:0016311|GO:0016791
Accr2g00501 330 MobiDBLite consensus disorder prediction 1 27 - -
Accr2g00501 330 ProSiteProfiles PTP type protein phosphatase domain profile. 50 319 IPR000242 GO:0004725|GO:0006470
Accr2g00501 330 Gene3D Protein tyrosine phosphatase superfamily 24 328 IPR029021 -
Accr2g00501 330 SMART PTPc_3 49 321 IPR000242 GO:0004725|GO:0006470
Accr2g00501 330 MobiDBLite consensus disorder prediction 1 26 - -
Accr2g00501 330 FunFam Tyrosine-protein phosphatase non-receptor type 12 29 327 - -
Accr2g00501 330 PANTHER RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE 27 321 - -
Accr2g00501 330 SMART ptp_7 216 318 IPR003595 -
Accr2g00501 330 Pfam Protein-tyrosine phosphatase 79 318 IPR000242 GO:0004725|GO:0006470
Accr2g00501 330 PRINTS Protein tyrosine phosphatase signature 215 232 IPR000242 GO:0004725|GO:0006470
Accr2g00501 330 PRINTS Protein tyrosine phosphatase signature 111 118 IPR000242 GO:0004725|GO:0006470
Accr2g00501 330 PRINTS Protein tyrosine phosphatase signature 129 149 IPR000242 GO:0004725|GO:0006470
Accr2g00501 330 PRINTS Protein tyrosine phosphatase signature 253 271 IPR000242 GO:0004725|GO:0006470
Accr2g00501 330 PRINTS Protein tyrosine phosphatase signature 286 301 IPR000242 GO:0004725|GO:0006470
Accr2g00501 330 PRINTS Protein tyrosine phosphatase signature 302 312 IPR000242 GO:0004725|GO:0006470
Accr2g00501 330 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 39 321 IPR029021 -
Accr2g00501 330 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 252 310 IPR000387 GO:0016311|GO:0016791
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr2g00501 Accr-Chr2 11327702 11333276 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr2g00501 30 326 Protein tyrosine phosphatase (PTP) family AT1G71860 58.278 4.17e-123 355
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr2g00501 - - cit:102606630 402.134