Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr2g00498 ATGGCTGCTTGGAATCCCTCCTCCGATTCACCCCCACCAATTTCTCTCACCGCCGATCAGCTCAAGCACTGTAATGAAGCGCTTGCCAGCTTTAGGGAGAGAAAGCCGGAGATGATCAAGGAAGAGTTCAAACGCTTGGAGGACAATGCGATAACACTAACTGAGCTGGCGAGAAGATGCACTGTAGCTCTAAATGACGTAAATCTACCCAAAAATCGGTATCCGGAAGATGTCCTGCCATTTGACGATAACAGGGTTGTTCTGGAATCAAGTTCAGATCATAGACCTACGGCCATGGGATATATCAATGCAAGCTTTCTCTCGATCTCTTCCTCTGAGAGTGTTTCTCAGTTCCTAGCTACACAAGGTCCACTGCCACATACTCGTGAGGATTTCTGGGAAATGGTAATCCAATACCGTTGCCCCGTCATCGTGAATCTCACTGGGCTTGTTGAAGCCAACAAGATTAAGTGTGACGATTATTTTCAAGCTGACGGTGAACCTATGAAGTTTGGTAACATCTCTATTGTTTGTGAATGGATGGAAACTGTTGAAAACTCATTGGTACTGCGCCTTTTGAAGGTGCATAGAAAGGAAAATCCTCCCTTTTCTGTTTTGCATATTCATTATCCTGAGTGGCCTGACCATGACGTTCCCCACGATACACTTGCTATGCGTGCAATTTTTAAGAGATTGTACCATGTACCACCAAAACTTGGCCCAATAGTGGTGCATTGCAGTGCAGGTCTTGGAAGAACTGGAACATACTGTGCTGTTCACAATACAATTCAGAGAATTCTTGTTGGTGAAAAGTCTGCCTTGGATCTTTATAATACCTTACTAGTCTTCAGGTCGCAGCGATATGGAATGGTTCAGAGACAGAGCCAGTACAATTTCTGCTATAAAGCTATAGTAGAGGCACTGGATGAACTTGTTTCTAATCATCATCAGCAATGA 957 0.442 MAAWNPSSDSPPPISLTADQLKHCNEALASFRERKPEMIKEEFKRLEDNAITLTELARRCTVALNDVNLPKNRYPEDVLPFDDNRVVLESSSDHRPTAMGYINASFLSISSSESVSQFLATQGPLPHTREDFWEMVIQYRCPVIVNLTGLVEANKIKCDDYFQADGEPMKFGNISIVCEWMETVENSLVLRLLKVHRKENPPFSVLHIHYPEWPDHDVPHDTLAMRAIFKRLYHVPPKLGPIVVHCSAGLGRTGTYCAVHNTIQRILVGEKSALDLYNTLLVFRSQRYGMVQRQSQYNFCYKAIVEALDELVSNHHQQ 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr2g00498 318 ProSitePatterns Tyrosine specific protein phosphatases active site. 244 254 IPR016130 GO:0016311|GO:0016791
Accr2g00498 318 PANTHER RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE 29 309 - -
Accr2g00498 318 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 31 309 IPR029021 -
Accr2g00498 318 Pfam Protein-tyrosine phosphatase 68 306 IPR000242 GO:0004725|GO:0006470
Accr2g00498 318 FunFam Tyrosine-protein phosphatase non-receptor type 12 18 315 - -
Accr2g00498 318 ProSiteProfiles PTP type protein phosphatase domain profile. 39 307 IPR000242 GO:0004725|GO:0006470
Accr2g00498 318 SMART ptp_7 204 306 IPR003595 -
Accr2g00498 318 Gene3D Protein tyrosine phosphatase superfamily 13 314 IPR029021 -
Accr2g00498 318 PRINTS Protein tyrosine phosphatase signature 100 107 IPR000242 GO:0004725|GO:0006470
Accr2g00498 318 PRINTS Protein tyrosine phosphatase signature 290 300 IPR000242 GO:0004725|GO:0006470
Accr2g00498 318 PRINTS Protein tyrosine phosphatase signature 241 259 IPR000242 GO:0004725|GO:0006470
Accr2g00498 318 PRINTS Protein tyrosine phosphatase signature 274 289 IPR000242 GO:0004725|GO:0006470
Accr2g00498 318 PRINTS Protein tyrosine phosphatase signature 203 220 IPR000242 GO:0004725|GO:0006470
Accr2g00498 318 PRINTS Protein tyrosine phosphatase signature 118 138 IPR000242 GO:0004725|GO:0006470
Accr2g00498 318 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 240 298 IPR000387 GO:0016311|GO:0016791
Accr2g00498 318 SMART PTPc_3 38 309 IPR000242 GO:0004725|GO:0006470
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr2g00498 Accr-Chr2 11289968 11310558 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr2g00498 19 314 Protein tyrosine phosphatase (PTP) family AT1G71860 58.804 1.08e-126 363
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr2g00498 - - cave:132184609 400.208