Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Accr2g00498 | ATGGCTGCTTGGAATCCCTCCTCCGATTCACCCCCACCAATTTCTCTCACCGCCGATCAGCTCAAGCACTGTAATGAAGCGCTTGCCAGCTTTAGGGAGAGAAAGCCGGAGATGATCAAGGAAGAGTTCAAACGCTTGGAGGACAATGCGATAACACTAACTGAGCTGGCGAGAAGATGCACTGTAGCTCTAAATGACGTAAATCTACCCAAAAATCGGTATCCGGAAGATGTCCTGCCATTTGACGATAACAGGGTTGTTCTGGAATCAAGTTCAGATCATAGACCTACGGCCATGGGATATATCAATGCAAGCTTTCTCTCGATCTCTTCCTCTGAGAGTGTTTCTCAGTTCCTAGCTACACAAGGTCCACTGCCACATACTCGTGAGGATTTCTGGGAAATGGTAATCCAATACCGTTGCCCCGTCATCGTGAATCTCACTGGGCTTGTTGAAGCCAACAAGATTAAGTGTGACGATTATTTTCAAGCTGACGGTGAACCTATGAAGTTTGGTAACATCTCTATTGTTTGTGAATGGATGGAAACTGTTGAAAACTCATTGGTACTGCGCCTTTTGAAGGTGCATAGAAAGGAAAATCCTCCCTTTTCTGTTTTGCATATTCATTATCCTGAGTGGCCTGACCATGACGTTCCCCACGATACACTTGCTATGCGTGCAATTTTTAAGAGATTGTACCATGTACCACCAAAACTTGGCCCAATAGTGGTGCATTGCAGTGCAGGTCTTGGAAGAACTGGAACATACTGTGCTGTTCACAATACAATTCAGAGAATTCTTGTTGGTGAAAAGTCTGCCTTGGATCTTTATAATACCTTACTAGTCTTCAGGTCGCAGCGATATGGAATGGTTCAGAGACAGAGCCAGTACAATTTCTGCTATAAAGCTATAGTAGAGGCACTGGATGAACTTGTTTCTAATCATCATCAGCAATGA | 957 | 0.442 | MAAWNPSSDSPPPISLTADQLKHCNEALASFRERKPEMIKEEFKRLEDNAITLTELARRCTVALNDVNLPKNRYPEDVLPFDDNRVVLESSSDHRPTAMGYINASFLSISSSESVSQFLATQGPLPHTREDFWEMVIQYRCPVIVNLTGLVEANKIKCDDYFQADGEPMKFGNISIVCEWMETVENSLVLRLLKVHRKENPPFSVLHIHYPEWPDHDVPHDTLAMRAIFKRLYHVPPKLGPIVVHCSAGLGRTGTYCAVHNTIQRILVGEKSALDLYNTLLVFRSQRYGMVQRQSQYNFCYKAIVEALDELVSNHHQQ | 318 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Accr2g00498 | 318 | ProSitePatterns | Tyrosine specific protein phosphatases active site. | 244 | 254 | IPR016130 | GO:0016311|GO:0016791 | |
Accr2g00498 | 318 | PANTHER | RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE | 29 | 309 | - | - | |
Accr2g00498 | 318 | SUPERFAMILY | (Phosphotyrosine protein) phosphatases II | 31 | 309 | IPR029021 | - | |
Accr2g00498 | 318 | Pfam | Protein-tyrosine phosphatase | 68 | 306 | IPR000242 | GO:0004725|GO:0006470 | |
Accr2g00498 | 318 | FunFam | Tyrosine-protein phosphatase non-receptor type 12 | 18 | 315 | - | - | |
Accr2g00498 | 318 | ProSiteProfiles | PTP type protein phosphatase domain profile. | 39 | 307 | IPR000242 | GO:0004725|GO:0006470 | |
Accr2g00498 | 318 | SMART | ptp_7 | 204 | 306 | IPR003595 | - | |
Accr2g00498 | 318 | Gene3D | Protein tyrosine phosphatase superfamily | 13 | 314 | IPR029021 | - | |
Accr2g00498 | 318 | PRINTS | Protein tyrosine phosphatase signature | 100 | 107 | IPR000242 | GO:0004725|GO:0006470 | |
Accr2g00498 | 318 | PRINTS | Protein tyrosine phosphatase signature | 290 | 300 | IPR000242 | GO:0004725|GO:0006470 | |
Accr2g00498 | 318 | PRINTS | Protein tyrosine phosphatase signature | 241 | 259 | IPR000242 | GO:0004725|GO:0006470 | |
Accr2g00498 | 318 | PRINTS | Protein tyrosine phosphatase signature | 274 | 289 | IPR000242 | GO:0004725|GO:0006470 | |
Accr2g00498 | 318 | PRINTS | Protein tyrosine phosphatase signature | 203 | 220 | IPR000242 | GO:0004725|GO:0006470 | |
Accr2g00498 | 318 | PRINTS | Protein tyrosine phosphatase signature | 118 | 138 | IPR000242 | GO:0004725|GO:0006470 | |
Accr2g00498 | 318 | ProSiteProfiles | Tyrosine specific protein phosphatases domain profile. | 240 | 298 | IPR000387 | GO:0016311|GO:0016791 | |
Accr2g00498 | 318 | SMART | PTPc_3 | 38 | 309 | IPR000242 | GO:0004725|GO:0006470 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Accr2g00498 | Accr-Chr2 | 11289968 | 11310558 | Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Accr2g00498 | 19 | 314 | Protein tyrosine phosphatase (PTP) family | AT1G71860 | 58.804 | 1.08e-126 | 363 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Accr2g00498 | - | - | cave:132184609 | 400.208 |