Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr2g00496 ATGGCTGCTTCAGCTTCTTACTCTGCTTTTTCTCACAAACCGTGGAATTCCTCCTCCGATTCACCCCCACCAATTTCTCTCACCGACGATCAGCTCAAGCACTGTAATGAAGCGCTTGCCAGCATTAGGTCGAGAACGCCGGAGATGATCGATCAAGAGTTCGCACACTTGGAGGCCAATGTGATAAAACTAAGTGAGCTGAGGAGAAGATGCACTGAAGCTCTAAATGACGTAAATCTGCACAAAAATCGATATCCGGAATTTGTCCTGCCGTTTGACGATAACAGGGTTGTTCTGGAATCAAGTTCAGATCATAGACCTACGGCCATGGGATATATCAATGCAAGCTTTCTCTCGGTCTCTTCCTCTGAGAGTGTTTCTAAGTTTATAGCTACACAAGGTCCACTGCCACATACTTGTGAGGATTTCTGGGAAATGGTAATCCAATACCGTTGCCCCGTCATTGTCAATCTCACTGCGCTCCTTGAACACAACAAGATTGTAAAGTGTGACGATTATTTTCAAGCTGAGGGTGAACCTATGAAGTTTGGTAACATCTCTGTTGTTTGTGAATGGATGAAAACTGTTGAAAACTCATTGGTACTGCGCCATTTGAAGGTGTATAGAAAGGAAGATCCTCCCTTTTCTGTTTTGCACATTCATTATCCCCAGTGGCCTGACTATGGAGTTCCCAACGATAGTCTTGCTGTGCGTGCAATTTTTAAGAGATTGTACCATTTACCACCAAAACTTGGCCCAATTGTGGTGCATTGCAGTGCAGGTATTGGAAGAACTGGAGCATACTGTGCTGTTCACAATACAATTCAGAGAATCCTTGTTGGTGATAAGTCTGCCTTGGATCTTTGTAATACCATATTTGTCTTCAGGTCGCAGCGATATGGAATGGCTCAGAAACAGAGCCAGTACAATTTCTGCTATGAAGCTATAGTAGAGGCACTGGATGAACTTGTTTCTAATCATCATCAGCAATGA 993 0.4361 MAASASYSAFSHKPWNSSSDSPPPISLTDDQLKHCNEALASIRSRTPEMIDQEFAHLEANVIKLSELRRRCTEALNDVNLHKNRYPEFVLPFDDNRVVLESSSDHRPTAMGYINASFLSVSSSESVSKFIATQGPLPHTCEDFWEMVIQYRCPVIVNLTALLEHNKIVKCDDYFQAEGEPMKFGNISVVCEWMKTVENSLVLRHLKVYRKEDPPFSVLHIHYPQWPDYGVPNDSLAVRAIFKRLYHLPPKLGPIVVHCSAGIGRTGAYCAVHNTIQRILVGDKSALDLCNTIFVFRSQRYGMAQKQSQYNFCYEAIVEALDELVSNHHQQ 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr2g00496 330 PRINTS Protein tyrosine phosphatase signature 111 118 IPR000242 GO:0004725|GO:0006470
Accr2g00496 330 PRINTS Protein tyrosine phosphatase signature 215 232 IPR000242 GO:0004725|GO:0006470
Accr2g00496 330 PRINTS Protein tyrosine phosphatase signature 302 312 IPR000242 GO:0004725|GO:0006470
Accr2g00496 330 PRINTS Protein tyrosine phosphatase signature 129 149 IPR000242 GO:0004725|GO:0006470
Accr2g00496 330 PRINTS Protein tyrosine phosphatase signature 253 271 IPR000242 GO:0004725|GO:0006470
Accr2g00496 330 PRINTS Protein tyrosine phosphatase signature 286 301 IPR000242 GO:0004725|GO:0006470
Accr2g00496 330 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 252 310 IPR000387 GO:0016311|GO:0016791
Accr2g00496 330 Coils Coil 64 84 - -
Accr2g00496 330 Pfam Protein-tyrosine phosphatase 79 318 IPR000242 GO:0004725|GO:0006470
Accr2g00496 330 ProSiteProfiles PTP type protein phosphatase domain profile. 50 319 IPR000242 GO:0004725|GO:0006470
Accr2g00496 330 Gene3D Protein tyrosine phosphatase superfamily 25 326 IPR029021 -
Accr2g00496 330 SMART ptp_7 216 318 IPR003595 -
Accr2g00496 330 FunFam Tyrosine-protein phosphatase non-receptor type 12 29 327 - -
Accr2g00496 330 PANTHER RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE 29 321 - -
Accr2g00496 330 ProSitePatterns Tyrosine specific protein phosphatases active site. 256 266 IPR016130 GO:0016311|GO:0016791
Accr2g00496 330 MobiDBLite consensus disorder prediction 1 27 - -
Accr2g00496 330 MobiDBLite consensus disorder prediction 1 26 - -
Accr2g00496 330 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 38 321 IPR029021 -
Accr2g00496 330 SMART PTPc_3 49 321 IPR000242 GO:0004725|GO:0006470
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr2g00496 Accr-Chr2 11141537 11156372 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr2g00496 30 326 Protein tyrosine phosphatase (PTP) family AT1G71860 58.804 6.02e-129 370
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr2g00496 - - qsa:O6P43_004107 412.535